Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04431 ATGGGGAAGCGAATTCGGGAGAAAGAGGCTGCAACATCTAATGGAATTAATTGTCATCCTACTCATCCAGGGCGAGTATGGGGAATTCTTCATGTTATAAAGTATCATCATTGGCGACATGTCAAGAGAAGGCTCACATACAGGAGGCATGGTGGTGGAAGACGTGATGCAAGAGATGATATTCCAGGAACTTCTGATGATTCTGTGGTTGATAATATGTCGTTACATTGTAAGCCAAGTCCAGCATTATCTAATGTTGAAGAAAAGATGGTACAATCCACTCCACCAGCCAAACAGTCTATTAAATCCAGGTTAAAAGCACTTCTTAATGAAGAAGTATACAAAAAGAAGGGTAGACATAAGAGAAGCTCAACCTGTCCTGCAAAGTCACAACTAAACCGTCCTGATTCTGTTCATCACTTGGAGGTTGATCCACTTAGTGAAATGTTATTAACTGTTGAGAGTCCTGAACCAGTTCTACAAACCTTTCAAAACCATCTTGCTGCTGGCACATTGGATGTATTGTCACCAGTTTTCTCTGGGAAATCAATTACCAACAATGGCAAATGTGTAGATTGTGGCATTATCTTTTCTAGTGACACTTTGGAAGATCACAAGACTCATAAGCATTGGACTGATACAAAAAACTTAAATGCCCAGCATGAAGGTGTGCCAGAAGAGAAGTTGATGAATGCAAAGATACTCACAACTGATGCTTCACCTCACCTTTTTAAGGATTTCCTTGATGCTCTGGATGTTATCAACACAAACAAGGACTTTCTATTAAAATATATACAGGATCCAGGCTCTCCTTTGCCATTCCACATTCATGATCATGAGTCTCCCAGTGGTAAAACAAGAAGATCCAAATCTATCTCATTTCCTGTTTCTGGCTCATCATCAGGAACCAAAGATTCTGCATCAGGCCAACTAATAAACCAAATGGTTGATGACTTGTTCATTGCAAATGTGGGGAGACAGTCACAAAATCAAAGTCACATGCAAAGTGTATCCATGCCTGAGTCTCCAGAAGATTTTCAACAAAAGTCCTTATCATCATCAGGTTCTTCACATAGAGGTGATCAATTCCTCAATCCAGATCAAGAAGGGGCTGGAAGAGATTGTAATAGTTCATCAGCTTCATCCCAGGTTCCTAACCAAGTGAAAACTAAGCATTTCAAGGATCTTAGAGAGAAGATAAAGTATATAATTGAAGAAAGCAAAAATGAAAAGTATCGCATTACCATGGATGCTATACTTGACAAAATTCCTCGTGGAAGTAGGCTTTCCAAGAATGTAAAGAAGTTGATCCATGACCAATTCAAAGACCCCACAAGCAATGGAGAAGGAAAAGACAATGCTTTGAATCGTCTTTCTTCTTACTCCTTCAATAAGCGTCAACCACCAAACATGAGGACTTCATCTCTAAAAGAATCAGCTAATAGATATTCTCAGCTGTATGAGACTTGTTTTAACAGTGAAGCCAAGTATCCTAAGACTGAGAACTTAAGATTGAAAACAGAAGAGAGACCAATAGTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCATTACCAAATTTAAAATCTTACTTCAATCATAGTGAGGAGCCTTCTGTTCATTTATCTCCCCAGAATTCAATGAGGAAATCTGGAGATAGAACCACAAGCACAAGTGTTATTGATCATCAGAGCAAGTTTGACCATAGTGATGACTCAAAGAGTCAAAATCTTCCACCTACACTTGCTGATAACACAAATCAAGAAAGTAGCTTGAATGCTGAACGAAAACAGCTTCTTGTGAGGAGTGCTTCAAAATCAGGATTTGATGTTTTAGGAAACTTGGGAGACAATGATGGTGTTTTAGGAAACCTGCCACCTACACTTGCTGATAACACAAATCAAGAAAGTAGCTTGAATGCTGAACAAAAGCAACTTCTTATGAGGAGTGCTTCAAAATCAGGAATAGATGTTTTAGGAAACTTGGGAGACAGTGATGATTTTGCTTGCAATGAACAGGACATTGGACCAGCAACAGAATATAGTCCTTTGCAGGTGGAAGGAAACTCAGTCTTCTCTTCTGACACCAGCTTCCTAGATGTTACATTTGAGCTTGAGAACTTAAACATACTGGAAGAATCAGATTTAGAATTAAAGCCAGGGCAAGATGATGAATTTGATAACATGACTGAGCAACATGAAGCTAATATTGATCACCCTGAGGTGGTTGAGAATTTTCAGAAATTTGGAACTCTAAGCAAGCGCTTCAACTATGAAATTCCAAGTATTGATGTGGATGCAAGTAATGAAGCTGCATTTAATTATGTGAGGAAGGTATTAGAACTCTCAGGGTTCACTAGGCATGAATCTCATGGGATATGGTATTCTGATGACCAGCCAGTTGATCCTTCAGTATATGAAGAATTGGAGGGCTGCTTGCTTCTGGATCCTGATTGTTCTGGAAATTGTGATGAAGATGGACAATGTAATCATCTTCTCCTGTTTGATATAATCAATGAAGGATTGATGGAGATTTTTGGGAGATCATACAACTATTATCCTAGACCCTTGTCTTCTCTCTCCCATGTTCATCCATTGCCAGCAGGAGATAATGTTCTCCATAAAGTATGGACACTTATTAGCTGGTATCTGAACTCACCATCTGAGGCTTACCCATCATTGGATTACTATGTGAGCAGAGATCTAGCAAAAAATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACATGATTTTTGATGATCTTTTGGAGGAAATTATCTGCACTTAA 2814 0.3891 MGKRIREKEAATSNGINCHPTHPGRVWGILHVIKYHHWRHVKRRLTYRRHGGGRRDARDDIPGTSDDSVVDNMSLHCKPSPALSNVEEKMVQSTPPAKQSIKSRLKALLNEEVYKKKGRHKRSSTCPAKSQLNRPDSVHHLEVDPLSEMLLTVESPEPVLQTFQNHLAAGTLDVLSPVFSGKSITNNGKCVDCGIIFSSDTLEDHKTHKHWTDTKNLNAQHEGVPEEKLMNAKILTTDASPHLFKDFLDALDVINTNKDFLLKYIQDPGSPLPFHIHDHESPSGKTRRSKSISFPVSGSSSGTKDSASGQLINQMVDDLFIANVGRQSQNQSHMQSVSMPESPEDFQQKSLSSSGSSHRGDQFLNPDQEGAGRDCNSSSASSQVPNQVKTKHFKDLREKIKYIIEESKNEKYRITMDAILDKIPRGSRLSKNVKKLIHDQFKDPTSNGEGKDNALNRLSSYSFNKRQPPNMRTSSLKESANRYSQLYETCFNSEAKYPKTENLRLKTEERPIVKTPKSFKRFLSLPNLKSYFNHSEEPSVHLSPQNSMRKSGDRTTSTSVIDHQSKFDHSDDSKSQNLPPTLADNTNQESSLNAERKQLLVRSASKSGFDVLGNLGDNDGVLGNLPPTLADNTNQESSLNAEQKQLLMRSASKSGIDVLGNLGDSDDFACNEQDIGPATEYSPLQVEGNSVFSSDTSFLDVTFELENLNILEESDLELKPGQDDEFDNMTEQHEANIDHPEVVENFQKFGTLSKRFNYEIPSIDVDASNEAAFNYVRKVLELSGFTRHESHGIWYSDDQPVDPSVYEELEGCLLLDPDCSGNCDEDGQCNHLLLFDIINEGLMEIFGRSYNYYPRPLSSLSHVHPLPAGDNVLHKVWTLISWYLNSPSEAYPSLDYYVSRDLAKNDGWMNLQFDSECVGLELDDMIFDDLLEEIICT. 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04431 937 MobiDBLite consensus disorder prediction 116 135 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 535 563 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 327 363 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 273 307 - -
Seca8g04431 937 Pfam Protein of unknown function (DUF3741) 227 270 IPR022212 -
Seca8g04431 937 PANTHER PROTEIN TRM32 1 937 IPR044257 -
Seca8g04431 937 MobiDBLite consensus disorder prediction 535 591 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 327 392 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 287 307 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 371 389 - -
Seca8g04431 937 MobiDBLite consensus disorder prediction 574 591 - -
Seca8g04431 937 Pfam Domain of unknown function (DUF4378) 773 933 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04431 Seca-Chr8 126405457 126409951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04431 706 927 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 42.972 2.07e-57 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04431 - - gmx:100807303 1172.15