Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04410 ATGCATAACATTTGTCTCAACATACCACCAATGGTTCAAAGCTTCGAGCCAGAGGATCTGTTCACACGTAAGTGCATATGGGTGAATGGACCTGTCATAGTTGGTGCTGGTCCTTCAGGTCTTGCAGTGGCTGCTGGTCTCAAAGACCAAGGTGTTCCTTTCATCATCCTTGAAAGAGCTAACTGCATTGCCTCTCTTTGGCAAAACCGCACTTATGATCGTCTAAAGCTTCATCTCCCTAAACAATTCTGTCAATTACCCAATTTCCCTTTCCCTGAGGACTTCCCTGAGTACCCCACAAAATTTCAGTTCATAAAGTACCTTGAATCCTATGCCAAGCACTTCAACATAAACCCACAGTTCAATGAAACAGTGCAATCTGCTAAGTATGATGAGACCTTTGGTTTGTGGAGGGTTAAGACAATTAGAAAAAGTGCCTCAGGTTCTAGTGAAGTTGAGTACATTTGCAGGTGGCTTGTGGTTGCTACTGGAGAAAATGCAGAGAAAGTGGTGCCTGAGTTTGAAGGGTTGGAAGAATTTGGTGGACATGTCATGCATGCTTGTGACTATAAATCTGGGGAGGGTTATACTGGGAAGAAAGTTCTTGTTGTTGGGTGTGGAAATTCAGGCATGGAAGTGTCTCTTGATCTTTGTAACCATAATGCAAGTCCTTCAATGGTGGTTAGAAGCTCTGTTCATGTGTTGCCAAGAGAAGTTTTTGGAAAATCAACTTTTGAGCTTGCAGTTATGTTGATGCAAAAACTACCCCTTTGGATGGTTGATAAGATATTGCTGATTCTGGCTCGTTTGATTCTGGGGAATATTGAAAAGTATGGTCTTAAGAGGCCATGTGAAGGTCCTTTAGAGCTGAAGAACAGTGCAGGGAAGACCCCTGTGTTAGACATTGGAGCACTTGAGAAAATTAGATCTGGTCAAATCAAAGTGGTTCCTGGAATCAGAAGATTCTCAGCAGGGAAAGTGGAACTTGTTGATGGCAAAGTTCTTCAGATTGATTCTGTTGTTCTTGCTACTGGCTACCGTAGCAATGTACCATCATGGCTAAAGCAGGAGAATGACTTCTTTTCCAATGATGGGGTTCCAAGAAATCCATTCCCAAATGGATGGAAAGGCAAAGCTGGTCTTTATGCTGTTGGGTTCACAAGGAGAGGCCTTTCTGGTGCATCTTTGGATGCAATTAGTGTGTCTCATGACATTGCAAAAAGCTGGAAAGAGGAAACTAAACAGAAGAAGAAAACAATGGCTGCACGCCATAGGAGATGCATATCACACTTTTAA 1296 0.4267 MHNICLNIPPMVQSFEPEDLFTRKCIWVNGPVIVGAGPSGLAVAAGLKDQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFIKYLESYAKHFNINPQFNETVQSAKYDETFGLWRVKTIRKSASGSSEVEYICRWLVVATGENAEKVVPEFEGLEEFGGHVMHACDYKSGEGYTGKKVLVVGCGNSGMEVSLDLCNHNASPSMVVRSSVHVLPREVFGKSTFELAVMLMQKLPLWMVDKILLILARLILGNIEKYGLKRPCEGPLELKNSAGKTPVLDIGALEKIRSGQIKVVPGIRRFSAGKVELVDGKVLQIDSVVLATGYRSNVPSWLKQENDFFSNDGVPRNPFPNGWKGKAGLYAVGFTRRGLSGASLDAISVSHDIAKSWKEETKQKKKTMAARHRRCISHF. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04410 431 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Seca8g04410 431 PRINTS Pyridine nucleotide disulphide reductase class-II signature 196 220 - -
Seca8g04410 431 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 32 424 - -
Seca8g04410 431 Gene3D - 30 418 IPR036188 -
Seca8g04410 431 FunFam Flavin-containing monooxygenase 31 414 - -
Seca8g04410 431 SUPERFAMILY FAD/NAD(P)-binding domain 32 233 IPR036188 -
Seca8g04410 431 SUPERFAMILY FAD/NAD(P)-binding domain 198 385 IPR036188 -
Seca8g04410 431 Pfam Flavin-binding monooxygenase-like 33 351 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca8g04410 431 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 218 - -
Seca8g04410 431 PRINTS FAD-dependent pyridine nucleotide reductase signature 156 174 - -
Seca8g04410 431 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04410 Seca-Chr8 126105826 126108292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04410 K11816 - gmx:100818345 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04410 8 126105826 126108292 Seca8g04410 8 126105826 126108292 ECH
Seca8g05537 8 146731934 146734041 Seca8g04410 8 126105826 126108292 PCT