Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04391 ATGGCAGCTCCGTTATCAAATTTTGCATGTTATAATGCAACATTGAGTTCTTCCAACAAAATCTGGATGGGTGATGATGTTCTTGCAAAACGTGTTCCACTTTTGTCTCTCCAAATTGCCTACAATATTGTGGCTTCTCGTTTTATATACCACATCCTTAGACCCCTCCATGTGCCTGCTATTATTGCACAAATTCTTGCTGGTTTTTTTATGAGTTCATCTGGGTTGGGAAGATATGAAAGTGTATTTAACATAATGTACCGTCAGGAAGGAATCCTAGCAGTTGAAACCTTTGCAAATTTGGGAATTATATATTATGTGTTCCTAAGTGGTTTAGAGATGAATTCAGAGACAGTGCTACGTTTAACAAAGAAGTCTACAAGCATTGCCATTGCTGGAATTGTGATTCCAATGTTGTTGGGGGTTGGTTTTCTTACTCTACAACACAAAATTCAATATGTCCCACGAGGGCTACAAGAATTATACAAACTTGAATCTGCTAAAGGGTATTTGTTCTGGTGTTTAACTCTTTCTGTCACAAGTTTCCCAGTTATTGCTCGAATCCTTGCTGAGCTCAAACTCCTATATACAAGGCTTGGCAAAGATGCCTTAATAGCAGCCATGTTGATTGATGCATATGGTTGGGTTTTATTCACAATGTTGGTTCCTTATGCTAATAGTGGTGGAAAACCATTACTTTCAGTATTGAGTACATTGTTGTTCATCATTTTTTGCTTTTGTGTGTTGCGTCCTATCCTTACTCCAATCATTGAACTCAAAACCAGCAAGGATAATTGGAATAAGTCTCAAGTGTTGGATGTGTTGATGGGCCTTTTTGTTTGTTCATATATTACAGATTTTTTTGGCACACATCCCATTGTTGGGGCTTTTGTGTATGGACTAATTTTACCTAATGGGAAGTTTGCTGATATGGTGATGGAAATGTCAGATGATTTTGTTACTGGGGTTGTGTGCCCTATCTATTTTGCTGGTTTTGGTATGAGATTCAATGTGGGCTTGATTACAGAACAACCAAATTCACATTTGATGATGTTCATTGTTCTACTGTTATCCATCCCAAAAGTTTTGAGCTCTTTAATAGTCACTTTCTTCTTTGGTATGCCTGCTAGAGATGGTGTGGCCATTGGATTGCTTCTAAACACCAAAGGCATCATGGCTGTGATACTACTCACCATTGCTTGGGACAAAAGAATGTTGGATCCACTTTCATTCACAGTTATGATGACTGCTTTTCTATTTATGACTGTGATGGTATCTCCTTTGATCAATGCTATATACAAGCCAAAATTTCGATTTATGCAGTCTCAACTAAGGACTGTGCAGAAGCTAAGGTTTGATGCAGAGCTTAGGATTGTGGCTTGTGTCCACAATACTCACCAAGCCACTAGCATAGCCCGGGTCCTTCAAGCCATGAATGCCACTAGAATTTCACCTTTACATGTATCTATACTTCACCTTGTTGAACTTACAAGACATGGTACTGCCCTTCTTGTTTCCCAAATAGACAACTCATCTGGCAGTGTGAAAGCAGAACACATGTATGGATCACAAGCAGAACTTGAGAACATAACCAATGTGTTTGTAGAACTTGCACAGGAATACAATGCTGTTAGATTTGACACATCTAGTGCTGTGTCATCTTATGCAACTATCCATGAGGACATATACAATGTAGCAGAAGAGAAACGTGCAAGCCTAATTCTTCTTCACTTTCACAAAGAGTTAACTTCAGAAGGTGCTCTAGAAATAACCAACAATGCACATATTGACATAAATAGACATGTTCTCCAAAAAGCACCTTGTTCAGTGGGGATCTTTGTGGACCGTGGAGTTGGGTCATGGTTAGAAACAAAATTGAACATTATTATGCTCTTCATTGGAGGGCCTGATGATCGTGAAGCCTTGTCTATTGCATGGAGAATGGCAGGGCATTCAGGAACAAAATTGCATGTTGTGAGGATTCATTTGTTAGGTGAAGTTATGGAAGAAAATGAAGATGAAATAGAAGACAATTATGGTAATGGGATGCTTTGTACAGTAATGGACAATGTGATGGAGAAAGAGTTGGATGAAGAGTACATATTTTCATTTAGGCACAAGGCAGTGAACAATAATGATTCCATTGTTTACTCAGAGAAAGAAGTGAGAACAAATACAGGTGAGGACATTCCTTTACTCCTCAATGAAATAGATAAACCTGGCTATGACTTATACATTGTTGGTCAAGGGAGTGGTAGCAAGTCCCCAATTTTTTCAAGATTGTTAGAATGGTGTGACAACCCTGAACTTGGGGTTATAGGGGACATAGTAGCTTCAACTAGTTTTGGCACACAATCTTCATTGCTTGTTGTGCAGCAATATATGCCTGGGAGAAAGCTTAAGTTCAAACGTCCCAAACAAAGTTCCCATAAGAAAGGTGATCATGATCTGTAA 2454 0.3875 MAAPLSNFACYNATLSSSNKIWMGDDVLAKRVPLLSLQIAYNIVASRFIYHILRPLHVPAIIAQILAGFFMSSSGLGRYESVFNIMYRQEGILAVETFANLGIIYYVFLSGLEMNSETVLRLTKKSTSIAIAGIVIPMLLGVGFLTLQHKIQYVPRGLQELYKLESAKGYLFWCLTLSVTSFPVIARILAELKLLYTRLGKDALIAAMLIDAYGWVLFTMLVPYANSGGKPLLSVLSTLLFIIFCFCVLRPILTPIIELKTSKDNWNKSQVLDVLMGLFVCSYITDFFGTHPIVGAFVYGLILPNGKFADMVMEMSDDFVTGVVCPIYFAGFGMRFNVGLITEQPNSHLMMFIVLLLSIPKVLSSLIVTFFFGMPARDGVAIGLLLNTKGIMAVILLTIAWDKRMLDPLSFTVMMTAFLFMTVMVSPLINAIYKPKFRFMQSQLRTVQKLRFDAELRIVACVHNTHQATSIARVLQAMNATRISPLHVSILHLVELTRHGTALLVSQIDNSSGSVKAEHMYGSQAELENITNVFVELAQEYNAVRFDTSSAVSSYATIHEDIYNVAEEKRASLILLHFHKELTSEGALEITNNAHIDINRHVLQKAPCSVGIFVDRGVGSWLETKLNIIMLFIGGPDDREALSIAWRMAGHSGTKLHVVRIHLLGEVMEENEDEIEDNYGNGMLCTVMDNVMEKELDEEYIFSFRHKAVNNNDSIVYSEKEVRTNTGEDIPLLLNEIDKPGYDLYIVGQGSGSKSPIFSRLLEWCDNPELGVIGDIVASTSFGTQSSLLVVQQYMPGRKLKFKRPKQSSHKKGDHDL. 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04391 817 Gene3D - 456 764 - -
Seca8g04391 817 Pfam Sodium/hydrogen exchanger family 44 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g04391 817 Gene3D - 34 439 IPR038770 -
Seca8g04391 817 PANTHER CATION/H + ANTIPORTER 9 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04391 Seca-Chr8 125792239 125795527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04391 10 795 Antiporter Super Family AT2G13620 36.875 4.09e-174 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04391 - K26731 gmx:100792990 1001.89