Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04361 ATGTGGAAATCCTGCTATAGTTTGTATGATCAGATATTCAAGCCCAGCAAGTTGCCTGGCAATGCGGACTTCCACTTGTTCAAGGCTGGGATTGAACCAAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTAGCCAGTAGTAGAAAGGCCAACCTCGATACCATGTGGCTTGAAACTCTGATGGCTTTAATTGGGGAGCAATTCGAGGATGCCGAGGACATATGTGGTGTGGTTGCAAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAGACTGCAGCAAATGAGGCTGCTCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGCTAATGACAAAATAACATACAACTTTCATGATGATGCTAGAAATCGAGGTGCAAAGGCTCGATACACTGTATAA 426 0.4554 MWKSCYSLYDQIFKPSKLPGNADFHLFKAGIEPKWEDPECANGGKWTVASSRKANLDTMWLETLMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDANDKITYNFHDDARNRGAKARYTV. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04361 141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 6 131 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca8g04361 141 ProSitePatterns Eukaryotic initiation factor 4E signature. 23 46 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Seca8g04361 141 Pfam Eukaryotic initiation factor 4E 6 123 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca8g04361 141 SUPERFAMILY eIF4e-like 5 136 IPR023398 -
Seca8g04361 141 Gene3D RNA Cap, Translation Initiation Factor Eif4e 2 141 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04361 Seca-Chr8 124528253 124531881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04361 6 141 Eukaryotic Initiation Factors Gene Family AT5G35620 65.000 9.87e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04361 K03259 - gmx:100781892 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04361 8 124528253 124531881 Seca8g04361 8 124528253 124531881 ECH