Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04309 ATGTCTGGAGAACTGGGAGTGCTGAATGCACTCGATGTTGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTTACTGATGCCTATGATCTCTTCTGTATTTCCCTTGTCACCAAATTGCTGGGGCGGATATATTACAGTGATCCAACTGCACCAAAGCCTGGAACTCTTCCTCCTAATGTTCAAGCTGCTGTGACTGGTGTTGCTCTATGTGGGACATTAGCAGGCCAACTATTCTTCGGTTGGCTTGGTGACAAGTTGGGAAGGAAAAAGGTTTATGGTTTAACTCTTATGCTGATGGTAGTGTGTTCCATTGCCTCAGGGCTCTCTTTTGGATCAAGTCCAAATGGTGTCATGGCCACTCTATGTTTCTTCAGGTTCTGGCTTGGGTTTGGGATTGGTGGTGACTACCCTCTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATAGCTGCAGTCTTTGCTATGCAAGGTTTTGGAATATTGTCTGGTGGAATAGTTGCCTTGATTGTCTCATCTGCATTTGACCACAAATACAAGGTTCCTAGCTATCAAGAAAATGCTGAAGCATCCTTGGTACTGCCTGCATTTGATTATGTTTGGCGTATTGTCTTAATGTTTGGTGCAGTCCCAGCAGCACTTACCTATTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACAGCCCTTGTTGATACCAATAGGTTTGGTTTGTTCAGTAAGGAATTTGCCAAACGCCACGGGCTACATTTGGTGGGAACCACTACCACTTGGTTCTTATTGGACATAGCATTCTATAGCCAGAACCTGTTCCAGAAGGACATTTTCAGTGCAATTGGATGGCTCCCTCCGGCACAAGAAATGAATGCAATCCATGAAGTTTATAAGATTGCAAGAGCACAAACACTGATAGCATTATGCAGTACTGTGCCAGGTTACTGGTTCACAGTGGCTTTTATAGATTACATGGGTCGTTTTGCTATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTTATGTTTGCTCTGGCTATACCATATGATCATTGGACCAAGAAAGAGAACAGAACTGGGTTTGTTGTGATGTACTCACTCACCTTCTTCTTCTCAAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATATTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGGGCAATTGTGGGTGCATTTGGATTCTTATATGCTGCACAAAGTAAGGACCCATCCAAGACTGATAAAGGGTACCCAACTGGTATTGGGATTAAGAATTCCCTTATTATGCTTGGTGTGATCAACTTCGCTGGTATGTTATTCACCTTACTGGTTCCAGAGTCAAAGGGAAAATCTCTAGAGGAGTTGAGTGGGGAGAATGAAGAAGGTGCTGAGGCGATTGAGCTAGCAGGGTCGGCTAGGACAGCTCCAGTTTGA 1515 0.4436 MSGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYSDPTAPKPGTLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSIASGLSFGSSPNGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSSAFDHKYKVPSYQENAEASLVLPAFDYVWRIVLMFGAVPAALTYYWRMKMPETARYTALVDTNRFGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWLPPAQEMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRTGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELSGENEEGAEAIELAGSARTAPV. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04309 504 FunFam Inorganic phosphate transporter 1-6 19 496 - -
Seca8g04309 504 CDD MFS_PhT 24 475 - -
Seca8g04309 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 476 IPR020846 GO:0022857
Seca8g04309 504 Gene3D MFS general substrate transporter like domains 19 498 IPR036259 -
Seca8g04309 504 SUPERFAMILY MFS general substrate transporter 11 483 IPR036259 -
Seca8g04309 504 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 479 - -
Seca8g04309 504 MobiDBLite consensus disorder prediction 480 504 - -
Seca8g04309 504 Pfam Sugar (and other) transporter 24 247 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca8g04309 504 Pfam Sugar (and other) transporter 329 482 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04309 Seca-Chr8 123062800 123064410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04309 4 491 Inorganic Solute Cotransporters AT3G54700 79.070 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04309 K08176 - rcu:8258353 847.81