Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04300 ATGCCTGGAGAACTTGGAGTGCTTAATGCACTTGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTTACTGATGCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAGTTGCTGGGGAGGATATATTACAGTGATCCAACTGCACCAAAGCCTGGAACTCTTCCTCCTAATGTTCAAGCTGCTGTGACTGGTGTTGCTCTTTGTGGGACATTAGCAGGCCAGCTATTCTTTGGTTGGCTTGGTGACAAGTTAGGAAGAAAAAAGGTCTATGGAATAACTCTTATTCTCATGGTAATATGTTCCTTTGCCTCAGGGCTCTCTTTTGGATCAAGTGCAAAGGGTGTCATGGCCACACTATGTTTCTTCAGGTTCTGGCTTGGGTTTGGGATTGGTGGTGATTACCCACTTTCTGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATAGCAGCAGTGTTTGCTATGCAAGGATTCGGAATCTTGTCTGGTGGAATAGTTGCCTTGATTGTCTCTGCTGGATTTGACCACAAATACAAGGTTCCTAGCTATCAAGAAAATCCACAAGCATCCTTGGTACTGCCTCAATTTGATTATGTTTGGCGAATTATTTTAATGTTTGGTGCAGTCCCAGCAGCACTTACCTACTACTGGCGTATGAAAATGCCAGAAACAGCTCGTTTCACAGCCCTTGTTGCCAAGAACGCAAAACAAGCTGCTGCAGACATGTCTAAGGTGTTGAATGTTGAACTTGAAGTTGAAGAGGAAAAGGTACAGAAAATTACAGAAGCAGATACCAATAAGTTTGGTTTGTTTAGTAAGGAATTTGCCAAACGCCATGGGCTGCATTTGGTGGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTATAGTCAGAACCTTTTCCAGAAGGACATTTTCAGTGCAATTGGATGGATCCCTCCTGCAAAGGAAATGAATGCAATCCATGAAGTTTATAAGATTGCAAGAGCACAAACACTGATAGCATTATGCAGTACTGTGCCAGGTTACTGGTTCACAGTAGCATTTATAGATTACATGGGTCGTTTTGCTATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTGGCTATACCATATGATCATTGGACCAAGAAAGAAAACAGAATTGGGTTTGTTGTGATGTACTCACTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATATTCCCAGCAAGACTAAGGTCTACTTGTCATGGAATCTCAGCAGCTGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGATTTTTGTATGCTGCACAGAGTAAGGACCCTACCAAGACTGATAAAGGGTACCCAACTGGTATTGGGATTAAGAACTCCCTTATTATGCTTGGTGTGATCAATTTTGCTGGTATGTTATTCACCTTATTGGTTCCAGAATCAAAGGGAAAATCACTAGAGGAGTTGAGTGGGGAAAAAGAAGAAGAAGCTGAGGCGACTGGGCATGCAGGTTCTGCTAGGACAGTTCCAGTTTGA 1611 0.432 MPGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYSDPTAPKPGTLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVICSFASGLSFGSSAKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSGGIVALIVSAGFDHKYKVPSYQENPQASLVLPQFDYVWRIILMFGAVPAALTYYWRMKMPETARFTALVAKNAKQAAADMSKVLNVELEVEEEKVQKITEADTNKFGLFSKEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELSGEKEEEAEATGHAGSARTVPV. 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04300 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
Seca8g04300 536 MobiDBLite consensus disorder prediction 512 526 - -
Seca8g04300 536 CDD MFS_PhT 24 507 - -
Seca8g04300 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Seca8g04300 536 Pfam Sugar (and other) transporter 24 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca8g04300 536 Gene3D MFS general substrate transporter like domains 19 531 IPR036259 -
Seca8g04300 536 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Seca8g04300 536 SUPERFAMILY MFS general substrate transporter 11 515 IPR036259 -
Seca8g04300 536 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca8g04300 536 MobiDBLite consensus disorder prediction 512 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04300 Seca-Chr8 123018902 123022193 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04300 4 523 Inorganic Solute Cotransporters AT3G54700 81.923 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04300 K08176 - gmx:100795623 917.531