Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04261 ATGGTGAGATCCCAAATGAATTTCAAGAGGCTCTCACTCACTGACATTAAGATTGATATTAAGAGGATCCCCAAGAAGAAGGATCTCATTAAAGCCATGGAGGATGCTGATGTTAAGAACAAGTGGGAGAAGAGCTCATGGGGAAGAAAACTGATTGTGCAGAAAAGAAGGGCAGCCCTCAATGATTTTGATAGGTTCAAGATAATGTTGGCCAAGATCAAGAGGTCTTCTGTTGTAAGGCAAGAGCTTGCTAAGCTGAAGAAGAGCGCATCTTAG 276 0.4239 MVRSQMNFKRLSLTDIKIDIKRIPKKKDLIKAMEDADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRSSVVRQELAKLKKSAS. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04261 91 PANTHER 60S RIBOSOMAL PROTEIN L14 1 89 IPR039660 GO:0003723|GO:0003735
Seca8g04261 91 Gene3D - 1 44 IPR014722 -
Seca8g04261 91 SUPERFAMILY Translation proteins SH3-like domain 3 51 IPR008991 -
Seca8g04261 91 Gene3D - 50 85 - -
Seca8g04261 91 Pfam Ribosomal protein L14 3 75 IPR002784 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04261 Seca-Chr8 121006697 121008177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04261 1 91 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 83.516 2.77e-48 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04261 K02875 - gmx:100499889 152.14