Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04255 ATGGCCAATGGCTTTTGTAACTGGAGGCATGATATGTTTAACTATGCACAAAACAACACAAGCAACCAAATTGCATGTAGATTGTGCAACCAAGCTTTCATAAACACTCAAGCCCTCATAACCCATATTGAGTCTCACATGGAACATGAAGAGGCTGCCATAAGAAGGCTCTATAATTCACCACAAGATATCAACTCTCATAAACAAGTGGTTTCCCATCACTTTCCATCCAGTTTCCAAGTTCCAAAAGAAACCCAAAACATTACTGAGGGCAGATTTTTCCAATCATCACCACAACCTTTGACCATGCCTCAGCCAAGAAGAAACCCATTTTTTAGTCCTAGCCAGGTTGGTTCCTCACAGCCAGTTAGGCAAATGCAACTTTTACCACAGGTTCTTTCATCTGCAAGGAATGAAGTAGTTGGAATAGCAGAGCTGTCAACTCCACAATTCTACAAAAGGAAGCTAGCAGAAGAATCTCCAAAACATGCTACTAAGGCATATATCATGCAGCTGGAGAAACCCATCAAGAAGATTGATTTCATTGATTTGGTTAACATTGATGATGACAACTCAGAGGAGCAAACATTGGATTTAGCACTTAAGCTCTAG 612 0.4052 MANGFCNWRHDMFNYAQNNTSNQIACRLCNQAFINTQALITHIESHMEHEEAAIRRLYNSPQDINSHKQVVSHHFPSSFQVPKETQNITEGRFFQSSPQPLTMPQPRRNPFFSPSQVGSSQPVRQMQLLPQVLSSARNEVVGIAELSTPQFYKRKLAEESPKHATKAYIMQLEKPIKKIDFIDLVNIDDDNSEEQTLDLALKL. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04255 203 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
Seca8g04255 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04255 Seca-Chr8 120802409 120803020 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca8g04255 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04255 - K23560 lja:Lj2g3v1643270.1 207.223