Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04205 GACAGAGCTTTGCCTGGTGATGGCAATGAAGTGGAAACTCCAAGGGCCAACGGAAAGAGAGGTTTCTCTGAAACAGTTGATCTAAAGCTTAATCTTCAATCCAAGCAAGATCTGAATGAAAATTTGAAGGATGTCTCAAAGGAAAATACCCTCCATAAGGATCCAGCAACAAAGCCACCATCTAAGGCACAGGTGGTTGGTTGGCCACCAGTGCGGTCATATAGGAAGAATATTATGTCACAAAAGGGTAATAGTGAAGATGGCACTGATCAGAAGACAACAAATAGCACTAATTCTGGGGCACTTGTCAAGGTTTCCATGGATGGTGCGCCTTACCTTCGCAAAGTGGACTTGAAAATCTACAAAAGCTACCAAGAATTATCCGATGCTCTGCTCAAAATGTTCAGATCCTTCACCATGGACTTCATGAATGAGAGCAAGTTGGTGGATCTTCTAAACAGCTCTGAGTTTGTGCCAACCTATGAAGATAAGGATGGGGACTGGATGCTCGTCGGTGATGTTCCATGGGAGATGTTTGTTGAATCGTGCAAGCGTATGCGAATAATGAAAGGATCAGAAGCAATTGGGCTTGCGCCAAGAGCCATGGAAAAATGCAAAAGCAGAAGCTGA 630 0.4413 DRALPGDGNEVETPRANGKRGFSETVDLKLNLQSKQDLNENLKDVSKENTLHKDPATKPPSKAQVVGWPPVRSYRKNIMSQKGNSEDGTDQKTTNSTNSGALVKVSMDGAPYLRKVDLKIYKSYQELSDALLKMFRSFTMDFMNESKLVDLLNSSEFVPTYEDKDGDWMLVGDVPWEMFVESCKRMRIMKGSEAIGLAPRAMEKCKSRS. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04205 209 MobiDBLite consensus disorder prediction 41 55 - -
Seca8g04205 209 MobiDBLite consensus disorder prediction 41 66 - -
Seca8g04205 209 MobiDBLite consensus disorder prediction 79 98 - -
Seca8g04205 209 ProSiteProfiles PB1 domain profile. 100 191 IPR000270 GO:0005515
Seca8g04205 209 Pfam AUX/IAA family 16 200 IPR033389 -
Seca8g04205 209 Gene3D - 94 203 - -
Seca8g04205 209 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 27 196 IPR003311 GO:0005634|GO:0006355
Seca8g04205 209 SUPERFAMILY CAD & PB1 domains 95 190 - -
Seca8g04205 209 FunFam Auxin-responsive protein 95 201 - -
Seca8g04205 209 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04205 Seca-Chr8 119538613 119541086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04205 92 199 B3 DNA Binding Superfamily AT4G23980 33.333 8.04e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Seca8g04205 AUX_IAA 2.8e-77 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04205 K14484 - gmx:547949 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04205 8 119538613 119541086 Seca8g04205 8 119538613 119541086 ECH