Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04204 ATGGCAGAGGGAACAATGTCAATAGTAAGGAAGACAAGCTTTTCCCCCAAAAGTACTTGGATCAAGTTCGATGCTACTGGCCATGGTTCCATAATCAATGTTGACAAGTATGACATCATGCGTCAAGTTCAGATTCATGCTCGTGATCTAAGGATTCTCGATCCCCTTCTCTCTTACCCTTCTACCATTCTTGCTCGAGAAAAGGTTCTTGTTTTGAACTTGGAGGTGCTTTTACAAGACCCAACAGATGAAGATGTGGTCCCTGTTGTTCAGGAATTACAGAGAAGGTTACCTGCCATTACCATTGTTACAAATCAAGAATGTCCTAGTCAACATGGTATTGAAGTTGAAGTGGATGAAAATGCAGAGTCGCCCTTTGAATTTCGGGCACTAGAGATAGTTTTAGAAGCAATTTGTAGTTTCCTTGATGCACGTACAACAGAACTGGAGATGGCTGCTTATCCTGCGTTAGATGAACTCACCACCAAGATTAGTAGTCGTAATTTGGACGAAGTTCGAAAATTGAAGAGTGCAATTACTAGGCTAAGTGTAAGGGTGCAGAAGGTAAGAGATGAGATTGAACAATTAATGGATGAGGAGGACAACATGGTTGACCTATACTTATCAAGAAAATTATTAGGTGTATCATCACCAATGAGTGGATCAGGTGCTGCTAATTGCTACGTTTCGTCCCCAACCATAGAATCAAAACTATCCGGAACAATTCTTGAACATGAAAATGATGTAGAGGAGCTTGAAATGCTATTAGAGGCCTATTTCATGCAAATTGATGCCACATTGAACAAATTGACCACAATTGACAGCCATCGAAATCAATTAATTCAGTTAGAGTTGTTTCTTAACTCGGGAGAACTTTCTTTGGCTTTCTATTCATTGGTGACTGGAATATTTGGCATGAACGTTCAATTTCCTTGGAATAAAGAGCATGGCTACTTGTTCAAATGGGTGGTTATTTTTACAGGAGTTTTTTCTATTGTTATCTTTTTTGTTATAGTTGCTTATGCTCGCAAAAAGGGGTTGGTTGGATGA 1050 0.3943 MAEGTMSIVRKTSFSPKSTWIKFDATGHGSIINVDKYDIMRQVQIHARDLRILDPLLSYPSTILAREKVLVLNLEVLLQDPTDEDVVPVVQELQRRLPAITIVTNQECPSQHGIEVEVDENAESPFEFRALEIVLEAICSFLDARTTELEMAAYPALDELTTKISSRNLDEVRKLKSAITRLSVRVQKVRDEIEQLMDEEDNMVDLYLSRKLLGVSSPMSGSGAANCYVSSPTIESKLSGTILEHENDVEELEMLLEAYFMQIDATLNKLTTIDSHRNQLIQLELFLNSGELSLAFYSLVTGIFGMNVQFPWNKEHGYLFKWVVIFTGVFSIVIFFVIVAYARKKGLVG. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04204 349 CDD Mrs2_Mfm1p-like 20 347 IPR039204 -
Seca8g04204 349 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 295 337 IPR045863 -
Seca8g04204 349 Gene3D Magnesium transport protein CorA, transmembrane region 293 346 - -
Seca8g04204 349 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 18 348 IPR039204 -
Seca8g04204 349 Coils Coil 242 262 - -
Seca8g04204 349 Gene3D Magnesium transport protein CorA, transmembrane region 82 285 - -
Seca8g04204 349 Gene3D - 7 78 - -
Seca8g04204 349 Coils Coil 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04204 Seca-Chr8 119517819 119534885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04204 15 323 MRS2 Gene Family AT5G64560 59.829 1.61e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04204 K16075 - gmx:100810239 421.779