Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04202 ATGTCGGAAGCCGCAAAACACTACCTTTTGAGCAACCCTGACGTCGTCACTTCTGTAGCATCGGAGAAATTTATTAACGTCTCAAGGACTTCAATGGCATGCCCACATGCTACAGGGGTAGCTACCTATATCAAATCCTTCCATCCTACATGGTCTCCTGCAACAATTAAGTCAGCAATTATGACAACAGGATGGGGGAGGTTGGACAGAAGCTAG 216 0.463 MSEAAKHYLLSNPDVVTSVASEKFINVSRTSMACPHATGVATYIKSFHPTWSPATIKSAIMTTGWGRLDRS. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04202 71 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 64 IPR045051 -
Seca8g04202 71 SUPERFAMILY Subtilisin-like 15 69 IPR036852 GO:0004252|GO:0006508
Seca8g04202 71 Gene3D Peptidase S8/S53 domain 19 64 IPR036852 GO:0004252|GO:0006508
Seca8g04202 71 ProSiteProfiles Serine proteases, subtilase domain profile. 1 71 - -
Seca8g04202 71 Pfam Subtilase family 18 63 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04202 Seca-Chr8 119502232 119504440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04202 23 65 Subtilisin-like Serine Gene Family AT5G58830 69.767 2.04e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04202 - - tcc:18590793 75.8701