Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04198 ATGGCTACATCTCTGGTGTTTACAGTGCGGAGGCGTGAGCCAGTACTTGTATCTCCTGCGAAACCCACCCATCGTGAAGTGAAACTACTCTCAGACATAGATGACCAAGAAAGCCTGCGTTTCCAAATTCCAGTGATACAGTTCTATCGCTATGATCCCTCAATGGCAGGGAAAGACCCTGTTGAGGTCATAAGAAAGGCACTGGCCAAGACACTTGTGTTTTACTATCCTTTTGCAGGTAGACTCAGGGAAGGGGCTGGTCGGAAACTGATGGTGGATTGTACTGGGGAGGGTGTTTTGTTCATTGAGGCAGATGCTGATGTCACGCTCAACCAATTTGGTGATGCTCTTCAACCTCCCTTCCCATGCTGGGAGGAGCTCCTTTACAATGTTCCTGGTTCTGAAGGAATCCTTAACACTCCCTTGCTGGTTATACAGGTAACACGCCTGAAGTGCGGTGGTTTCATTTTTGCTCTGCGGTTGAACCATACCATGAGTGATGCAGCTGGTTTGGCCCTATTCATGAACGCCTTGGGCGAAATAGCTCGCGGGATGGACGAACCTTCAATCCCACCAGTTTGGCGCAGAGAGCTTCTAAATGCAAGGGACCCACCAAGAGTGACATGTACCCATCGCGAATACGAACAAGTACCAGACACCAAGGGAACCATCATCCCCTTAGATGACATGGCCCATCGCTCTTTCTTCTTTGGTCCCAAAGAGGTATCTGCAATTCGTGGCCTCCTTCCTCTCCACCTTCGTCAATGCTCCAATTTCGAAATTCTCACCGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAGCCAGACAGTGACGAGGAGGTTCGCTTAATTTGCATTGTTAACGCACGCGCCAAATTTGACCCTCCATTACCGTCCGGTTACTATGGCAACGCTTTTGCATTTCCCGTTGCGGTTACAACTGCAGTGAAGCTGTTTGAAAATCCGTTGGGATATGCGCTGGAGTTAGTGAGGAAAGCAAAAGCTGATGTGACTCAAGAGTACATGCATTCGTTGGCAGATCTAATGGTCACCAATGGACGACCTCATTTTACTGCGGTAAGGTCCTACCTTGTGTCGGATGTGACACGTGCCGGGTTCGGAGAGGTTGATTTTGGGTGGGGAAAGCCTGTTTATGGAGGACCAGCCAAAGGAGGAGTTGGAACCATACCTGGTTTGGCAAGCTTTTACATACCTTTTAAAAATGCTAAAGGAGAGGAAGGCTTAGTTATACCTGTTTGTTTACCATCAGATGCCATGGAGAGGTTTGTAAAAGAGTTGGATAACATGCTAAACAACCATGTCCAACCTGCTAAGCGTGGTTTTATCGTTTCTTCGTTGTAG 1365 0.4835 MATSLVFTVRRREPVLVSPAKPTHREVKLLSDIDDQESLRFQIPVIQFYRYDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYNVPGSEGILNTPLLVIQVTRLKCGGFIFALRLNHTMSDAAGLALFMNALGEIARGMDEPSIPPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPKEVSAIRGLLPLHLRQCSNFEILTACLWRCRTIALQPDSDEEVRLICIVNARAKFDPPLPSGYYGNAFAFPVAVTTAVKLFENPLGYALELVRKAKADVTQEYMHSLADLMVTNGRPHFTAVRSYLVSDVTRAGFGEVDFGWGKPVYGGPAKGGVGTIPGLASFYIPFKNAKGEEGLVIPVCLPSDAMERFVKELDNMLNNHVQPAKRGFIVSSL. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04198 454 Gene3D - 8 214 IPR023213 -
Seca8g04198 454 PANTHER ACYL TRANSFERASE 4 7 438 - -
Seca8g04198 454 Pfam Transferase family 12 435 - -
Seca8g04198 454 Gene3D - 215 434 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04198 Seca-Chr8 119427036 119430535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04198 9 434 Monolignol Biosynthesis Gene Families AT5G48930 31.707 1.95e-51 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04198 K19861 - gmx:100797017 790.415