LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g04187	ATGAGCGATGCAGCTGGTTTGGCCCTATTCATGAGCGGCTTAGGCGAAATAGCTCGCGGGATGGATGAACCTTCAATTCCACCAGTTTGGCGCAGAGAGCTTCTAAATGCAAGGGACCCGCCAAGAGTGACATGCACCCATCACGAGTACGAACAAGTACCAGACACCAAAGGAACAATCATCCCCTCAGACGACATGGCCCATCGCTCTTTCTTCTTTGGACCTAAAGAGGTATCCGCAATTCGTGGCCTCCTTCCTCTCCACCTTCGTCAATGCTCCAATTTCGAAATTCTCACTGCATGCCTCTGGCGTTGCCGCACAATAGCTTTGCAGCCAGACAATGATGAGGAGGTTCGCCTAATTTGCATTGTTAACGCACGCGCCAAGTTTGACCCTCCATTACCGTCCGGTTACTATGGCAATGCTTTTGCATTTCCAGTTGCGGTTACAACTGCAAGGCAGCTATGTGAAAATCCCTTGGGATATGCGCTAGAGTTAGTGAGGAAAGCAAAAGCTGATGTGACTCAAGAGTATATGCATTCGATGGCAGATCTAATGGTCACCAAGGGACGACCTCATTTTACTATGGGAAGGTCCTACCTTCTGACAGATTTGACGCGTGCCGGTTTAAGAGAGGTTGATTTTGGGTGGGGAAAGGCTGTTTATGGAGGACCTGCAGACAAAGGAGGAATACCTAGTGTGGCAAGCTATTATTTACGTTCTAAAAATGCTAAAGGAGAGGAAGGTATAGTCATACCGGTTTGTTTACCATCAGATGCCATGGAGAGGTTCATAAAAGAGTTGGATAACATGCTTAACAACCATGTCCAACCTGCTAAGGGTGGTTTTATCGCTTCTTCGTTGTAG	867	0.4752	MSDAAGLALFMSGLGEIARGMDEPSIPPVWRRELLNARDPPRVTCTHHEYEQVPDTKGTIIPSDDMAHRSFFFGPKEVSAIRGLLPLHLRQCSNFEILTACLWRCRTIALQPDNDEEVRLICIVNARAKFDPPLPSGYYGNAFAFPVAVTTARQLCENPLGYALELVRKAKADVTQEYMHSMADLMVTKGRPHFTMGRSYLLTDLTRAGLREVDFGWGKAVYGGPADKGGIPSVASYYLRSKNAKGEEGIVIPVCLPSDAMERFIKELDNMLNNHVQPAKGGFIASSL.	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g04187	288	Pfam	Transferase family	1	269	-	-
	Seca8g04187	288	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	1	269	-	-
	Seca8g04187	288	Gene3D	-	49	267	IPR023213	-
	Seca8g04187	288	Gene3D	-	1	48	IPR023213	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g04187	Seca-Chr8	119298618	119308171	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g04187	10	268	Monolignol Biosynthesis Gene Families	AT5G48930	28.102	1.19e-22	95.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g04187	K19861		-	gmx:100797017	469.159