Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04180 ATGAAGAGGGTTGACTTTATTGGTTTAAGTTGTGAGGATGTGAAATTGTACCATTTTCGGAGTCTTGTTGTTTCCTTTGATTTTTATAATACTTATGCACAAAAAAGGGGGTGTGCAGCTCGGAGGTGTAATGTTGTGAAAAATAAGAGAGGTGAAGTAACACAACAAGTCTTTATGTGTTTCAAGGAGGGATTTCGCCTAAAGAAACATTTAGTGAGGGTAGACAGAAAGAAGGAGCCAAGAGCAATGACAAGATGTGGGTGTTTGCTTTTTGTCGTGTCCATTTTCAATGAGAGGCGGGGAGGTGGCATGTCAAAGCTTTCCATGATGAGCACACTCATGGGATATTAG 351 0.4046 MKRVDFIGLSCEDVKLYHFRSLVVSFDFYNTYAQKRGCAARRCNVVKNKRGEVTQQVFMCFKEGFRLKKHLVRVDRKKEPRAMTRCGCLLFVVSIFNERRGGGMSKLSMMSTLMGY. 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04180 116 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 89 - -
Seca8g04180 116 Pfam FAR1 DNA-binding domain 27 89 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04180 Seca-Chr8 119072344 119072694 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04180 FAR1 8.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04180 - - aip:107620900 89.3521