Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04157 ATGGTGGAGAAGTTCTTGACCGTGCCGCCATTTGAGTGCGCGTGGCGAGAGGAGTTGAAATTCCGTGAAGCAGGTAGGGGTTGCGTGGCTTTCGAGGCATTCGCCTGCAACGATGTGACTCTGGTTTTCAGGGAGAATGTGGGAAGCCAGGGGTACCACTATAAAAGAGATAGCAGTCCTCACTACACAATCATATTGGGGAGTCACAGGAATCGAAGGCTCAGAATTGAGGTCAATGGAAAAACGGTTGTTGATGTGGCAGGGGTTGGACTTTGTTGCTCAAACTCCTTTAGGAGCTATTGGATCAGCATCTACGATGGCTTGATTAGCATAGGTAATGGGAAATACCCTTTTCAGGATGTTGTGTTCCAGTGGTTGGATTCTCATCCCAATTGTAATGTTCAGTATATTGGGCTCAGTAGCTGGGATAAACATGTTAAGTATAGAAATGTTAATGTCTTGTCATTGAATCACACTCACATGCCCCTGTGGAAGCCTGTGGCTTTTGGTGATTATCAAGTTGAGGAGGGTGAGGTTGATGTAGACAAACAGATGGATTATGACAAATGGGGCCTCAAAAATTTTCTCGAGAGTTGGGACTTGTCTGACATGTTGTTCATCGTTGGTGATGAGGAAAGGCCTGTTCCTGCTCACAAGGCAATTTTAGCTGCATCTGGAAATTTTCCTTTGTGCTCCTCCTCTTTTGTCATCAAACTACCCACAGTATCTTACCAGCTTCTCCATGCACTGCTTCACTACATCTACACTGGCTGGACCCAGGTTCCACAGGAACAACTTGGTTCTTTGAGGGATTTAAGTCTACAGTTTGAAGTGATGCCACTGGCGAAGCAATGTGAAGAGATTATAGAACGGTTTAAGCTAGATAAGAAGTTGTTGGACACGGGCAAGAATGTGGAGTTAACATATCCATGTATCCAACCTCATTGTTCAACTTTGCCCTCACTTCCTATCAACATTGAGAGACTGAGACAATTGAAATTAACAGGCCAGTACAGTGATGTAAAGATCTACATTGAGGGTTATGGGCTTGTTGCACAAGCACATAAAATTGTTCTCAGCTTGTGGAGTATTACCTTTGCCAAGATGTTCACAAATGGAATGAGTGAAAGCATGTCCTCAGAGGTTACTTTATGGGATGTGCCAGCAGAAGCTTTCACGGCTATGCTTGACTTCTTATATGATGGACAATTGAATGAGAAAGTTATAGATTCTGGTTGTTTGTTGCTCCAGCTCCTTTTATTGGCTGATCAATTTGGAGTGACTTTTCTTCACCAAGAATGCTGCAAAATGCTTTTAGAATGCCTCTCAGAGGTAGTTTGGTAA 1344 0.4353 MVEKFLTVPPFECAWREELKFREAGRGCVAFEAFACNDVTLVFRENVGSQGYHYKRDSSPHYTIILGSHRNRRLRIEVNGKTVVDVAGVGLCCSNSFRSYWISIYDGLISIGNGKYPFQDVVFQWLDSHPNCNVQYIGLSSWDKHVKYRNVNVLSLNHTHMPLWKPVAFGDYQVEEGEVDVDKQMDYDKWGLKNFLESWDLSDMLFIVGDEERPVPAHKAILAASGNFPLCSSSFVIKLPTVSYQLLHALLHYIYTGWTQVPQEQLGSLRDLSLQFEVMPLAKQCEEIIERFKLDKKLLDTGKNVELTYPCIQPHCSTLPSLPINIERLRQLKLTGQYSDVKIYIEGYGLVAQAHKIVLSLWSITFAKMFTNGMSESMSSEVTLWDVPAEAFTAMLDFLYDGQLNEKVIDSGCLLLQLLLLADQFGVTFLHQECCKMLLECLSEVVW. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04157 447 CDD BTB_POZ_ZBTB_KLHL-like 338 405 - -
Seca8g04157 447 SMART BTB_4 202 293 IPR000210 GO:0005515
Seca8g04157 447 SMART BTB_4 339 442 IPR000210 GO:0005515
Seca8g04157 447 Gene3D Potassium Channel Kv1.1; Chain A 190 305 IPR011333 -
Seca8g04157 447 Gene3D Potassium Channel Kv1.1; Chain A 324 444 IPR011333 -
Seca8g04157 447 ProSiteProfiles BTB domain profile. 202 263 IPR000210 GO:0005515
Seca8g04157 447 SUPERFAMILY POZ domain 191 289 IPR011333 -
Seca8g04157 447 Pfam Farnesoic acid 0-methyl transferase 50 146 IPR022041 -
Seca8g04157 447 SUPERFAMILY POZ domain 327 439 IPR011333 -
Seca8g04157 447 CDD BTB_POZ_ZBTB_KLHL-like 201 276 - -
Seca8g04157 447 PANTHER OS05G0345500 PROTEIN 3 442 - -
Seca8g04157 447 Pfam BTB/POZ domain 330 440 IPR000210 GO:0005515
Seca8g04157 447 Pfam BTB/POZ domain 192 291 IPR000210 GO:0005515
Seca8g04157 447 ProSiteProfiles BTB domain profile. 339 408 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04157 Seca-Chr8 118550286 118556856 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Seca8g04157 BTB 1.9e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04157 - - gmx:100810794 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04157 8 118550286 118556856 Seca8g04157 8 118550286 118556856 ECH