Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04156 ATGGAAATTGAAATAATCTCCACTCAGTTCATCAAACCTTCTTCCCCAACACCAAAACATCTGAAAACTCACAAGCTCTCTCTTTTAGACCAGTTTGTGCCTTCTATACACACACCCGTGGTACTTTTCTACTCTGATCTAGATAAGAACACCCAACCCAAAAATAATGACACCACTCAGCAAAGATTGAATCAGCTAAAGGAATCCTTATCAGAAATCTTGACTCATTTTTACCCCTTCGCTGGAAGGATCAAAGACAATCTTTCCATAGATTGCAATGATGAAGGGGTTCACTATGTTGAGGCCAAATCAAGCTACAATCTGGTTGAATTTTTAAACCAATCTAATTTATCTTCATTTATCCACAAACTCCTTCCAAGTCAACCCACATGGGAACAAGAACCAAACGAAGGATATGTGGCTATGATACAAGTGACATGCTTTCCATGTGGTGGCATAGTGATTGGTGCCTTAGTGTCTCATATGGTAGCAGATGGAGTTGGTGCTAGCTTCTTTTTAAAGAGTTGGGGTGCTACCTCTCGCAGGGAATTTCCATATGAATTCCCAAAATTTGATTCCCCTTTCAGTGATGCATTGTCAAAAGATTTAAACGTGATGGCTCTGTCTGACCAATTCTTGAATAATGGTAGGCTTGATAAGAGGAGATTTTTGTTTGATGCAGAAGCTATTTCTAAGCTAAAAGCCAAAGGGTCTAATTCAACAGTGCAAAATCCTACTCGAGTGGAGGTAGTATCATCCCTCATATGCAAATGTGCCTCAGAAGCTTTCAGGGCAAACTCTGGTTTGGAGAGGCCAACTTTGTTAACACATGCTATGAATCTGCGTCCAAGGGCAAATCCTGCTTTTCCAGAATCATGTATGGGTAATTTCGTTTGGACAGCTTTTGCTCTAATGAGTAAAAAAGAGTTACCTGAATTGGTTGTTGAATTGAGGGAAGCAGTGACAGGTATTAACTCAGATTTTGTGAAAGGCTTCGAAGGTGAAGGAGGGTATGTAAGGTACAATGAGGTTTTAACAGAGATGGTTGAGAAAGCCTCGAGTGTTGCACTAACTAATGGGGTGAATTATGTTCATTGTACAAGTTGGTGTAATTTTGGTCTTTATGATTTTGATTATGGATGGGGAAAACCAACTTGGGTGTCTAGCACTACTATTTCCCCTGAAGTTGATGTTGTGTTTTTCAACTCGGTCCTCCTAATGGATACACCATCAGGCAATGGAATAGAAGCTTGGATTTATTTAAATGAGGATGATATGACTGTAATGCAACAGGACAAAGAGCTCCTTACTTTTGCCACCTTAGATCCAAATCCTTTACAAATAAACAGTTTTATGGAAAAATCTAACGATGTAGTGATTGGTAATTTAGATGATGATATAGATCCTTTTCATATTGTTAGTTCTGACGATAGTGCAAGTGATGAGGCAAATAATGTTATTGGTTCTGATAGTGATAGTAAGAGTGAGAGTAGTAGTGATAGTGAGAAAGATATACCTAATAATAGTGAACATAAAGTCTCAGGTGAAAATGAGACCTCTTTAATTGATGTTGGAGTTAAAAAATTTAAAAGAATAGACGAATTGACTAATGAAGATATTTTGGGGTTAGATTTTGGTAGTGAAAAAGAAGCTGGTGATTTTTATGAGACTTATTCAAAGAGCTTGGGTTTTGCTATAAGAAAAGATGATGTAAAGAGGGATGTTAGGGGCCAGACAAATAGGTGGAAAGTGGTGTCATTTGTCTACACTCATAACCATGAACTATGCCCATCAGAATATAGGCACCTGATTAGTGCATATCGCTGTATTCCGGATTCAGATAAAGCACAGATTGATAGCTTGCATGCACATGGGGATAAGGAATCATCACTGAATGAAGGGTTTGGGGATGGTGACAATGTTGACCCTAAAGCGATCGAAAGCTAA 1947 0.3852 MEIEIISTQFIKPSSPTPKHLKTHKLSLLDQFVPSIHTPVVLFYSDLDKNTQPKNNDTTQQRLNQLKESLSEILTHFYPFAGRIKDNLSIDCNDEGVHYVEAKSSYNLVEFLNQSNLSSFIHKLLPSQPTWEQEPNEGYVAMIQVTCFPCGGIVIGALVSHMVADGVGASFFLKSWGATSRREFPYEFPKFDSPFSDALSKDLNVMALSDQFLNNGRLDKRRFLFDAEAISKLKAKGSNSTVQNPTRVEVVSSLICKCASEAFRANSGLERPTLLTHAMNLRPRANPAFPESCMGNFVWTAFALMSKKELPELVVELREAVTGINSDFVKGFEGEGGYVRYNEVLTEMVEKASSVALTNGVNYVHCTSWCNFGLYDFDYGWGKPTWVSSTTISPEVDVVFFNSVLLMDTPSGNGIEAWIYLNEDDMTVMQQDKELLTFATLDPNPLQINSFMEKSNDVVIGNLDDDIDPFHIVSSDDSASDEANNVIGSDSDSKSESSSDSEKDIPNNSEHKVSGENETSLIDVGVKKFKRIDELTNEDILGLDFGSEKEAGDFYETYSKSLGFAIRKDDVKRDVRGQTNRWKVVSFVYTHNHELCPSEYRHLISAYRCIPDSDKAQIDSLHAHGDKESSLNEGFGDGDNVDPKAIES. 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04156 648 PANTHER F21J9.9 4 439 - -
Seca8g04156 648 MobiDBLite consensus disorder prediction 622 648 - -
Seca8g04156 648 MobiDBLite consensus disorder prediction 471 517 - -
Seca8g04156 648 Gene3D - 1 203 IPR023213 -
Seca8g04156 648 Gene3D - 218 439 IPR023213 -
Seca8g04156 648 MobiDBLite consensus disorder prediction 477 494 - -
Seca8g04156 648 Pfam Transferase family 1 435 - -
Seca8g04156 648 MobiDBLite consensus disorder prediction 495 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04156 Seca-Chr8 118469281 118474434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04156 1 431 Monolignol Biosynthesis Gene Families AT5G48930 25.053 2.90e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04156 - - aprc:113870852 601.282