Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04121 ATGAGGATATTTCCCTCTTTGGAGTCGAGAGCGATATGCCGGTACGTTTGTGAGAAACATAAGGAAAAGGGGAACAAGGGACTGTACGGAACGAACCCTTTGGCAAAGGCATCGATAGATCAGTGGTTAGAAGCAGAGGGGCAAAACTTCAACCCACCCACCTCAACTTTGGTGTTTCAGCTTGCATTCGCTCCCCGAATGAAGTTAAAACAGGACGAGGGAGTGATCAAGCAGAACCAAGAGAAGCTGGCAAAAGTGCTTGATGTGTATGATAAGAGGCTTGCGGAGAATCGTTTCTTGGCTGGGGATGAATTCTCTCTCGCTGACCTTTCCCATCTCCCAAACACTCACTATTTGGTCTCTGCTGATTCCGACACAGCCGCACTCTTCACTTCCAGGAACAATGTCTCTAGGTGGTGGACTGAGATCTCTACTCGTGAATCCTGGAAAAAGGTCGTGGATTTGCACGGAACTGCTTGA 480 0.4833 MRIFPSLESRAICRYVCEKHKEKGNKGLYGTNPLAKASIDQWLEAEGQNFNPPTSTLVFQLAFAPRMKLKQDEGVIKQNQEKLAKVLDVYDKRLAENRFLAGDEFSLADLSHLPNTHYLVSADSDTAALFTSRNNVSRWWTEISTRESWKKVVDLHGTA. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04121 159 Gene3D - 31 153 - -
Seca8g04121 159 FunFam Glutathione S-transferase F2 30 153 - -
Seca8g04121 159 SFLD Main (cytGST) 7 146 - -
Seca8g04121 159 CDD GST_C_Phi 34 153 IPR034347 -
Seca8g04121 159 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 32 159 IPR010987 -
Seca8g04121 159 SFLD Glutathione Transferase (cytosolic) 7 146 IPR040079 -
Seca8g04121 159 PANTHER GLUTATHIONE S-TRANSFERASE RHO 7 154 - -
Seca8g04121 159 Pfam Glutathione S-transferase, C-terminal domain 51 147 IPR004046 -
Seca8g04121 159 SUPERFAMILY GST C-terminal domain-like 24 153 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04121 Seca-Chr8 117792222 117793396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04121 7 152 Glutathione S-transferase Gene Family AT2G30870 46.575 1.97e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04121 K00799 - pvy:116119007 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04121 8 117792222 117793396 Seca8g04121 8 117792222 117793396 ECH