Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04115 ATGAGGGGAAAGGTGGGAAAATGGCGAAGCATTTGGGTTTGGAATGACGTTAAAGTAAAACGCAAAACTGGAACATGTTGGGGTTTGCGGCAGTTGCACGAGGGCCCAGACACCGTAGAGGAGCTTCTCGATAGACATCTAGTCAAGAAGGATAAGACAAAAGAGGATAACTATTCGGACGAGTTGCTGAATCGGAGTCGACTCACCAGCACTCGCCGAGAAGCGCTCAGTCTCTACAGGGACATTCTTCGGGCCTCTCGCTTCTTCACCTGGCCCGATTCCAACGGTGTCCTCTGGCGTGACGTCCTAAGAGACAGCGCAAGGAGAGAGTTCGAACTGGCCCGATTCGAAACCGACCCGGAAATCGTGACCCGCTTGCTTATCGGTGGCCACGAGGCCGTGCACTCTGCTATTGATAAGCTCACTGAGAAGCAGAGGCAACAGATTCAGAAGGATCGTGGCGGTTCTGATCAACGCTGA 480 0.5292 MRGKVGKWRSIWVWNDVKVKRKTGTCWGLRQLHEGPDTVEELLDRHLVKKDKTKEDNYSDELLNRSRLTSTRREALSLYRDILRASRFFTWPDSNGVLWRDVLRDSARREFELARFETDPEIVTRLLIGGHEAVHSAIDKLTEKQRQQIQKDRGGSDQR. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04115 159 CDD Complex1_LYR_LYRM7 75 135 IPR045298 GO:0034551
Seca8g04115 159 Pfam Complex 1 protein (LYR family) 73 133 IPR008011 -
Seca8g04115 159 PANTHER COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04115 Seca-Chr8 117621859 117625792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04115 - - psat:127098687 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04115 8 117621859 117625792 Seca8g04115 8 117621859 117625792 ECH