Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04110 ATGAATGGAAGGCTTGGAGATTTTGGGTTAGCCAGAATGCACAACCACGGTCAAATTTCTAGCACCACAAAATTGGTTGGAACATATGGGTACATGGCTCCTGAAGTGATTAAGACTGGATGA 123 0.4309 MNGRLGDFGLARMHNHGQISSTTKLVGTYGYMAPEVIKTG. 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04110 40 PANTHER - 1 37 - -
Seca8g04110 40 SUPERFAMILY Protein kinase-like (PK-like) 3 40 IPR011009 -
Seca8g04110 40 Gene3D Transferase(Phosphotransferase) domain 1 1 40 - -
Seca8g04110 40 ProSiteProfiles Protein kinase domain profile. 1 40 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04110 Seca-Chr8 117556087 117556209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04110 1 40 Receptor kinase-like Gene Family AT3G45430 65.000 3.48e-14 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g04110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04110 - - gsj:114386544 79.7221