Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04101 ATGGATCGGTACCAGAAGGTGGAGAAGCCAAGAGCTGAAACGCCAATCGATGAAAACGAGATCCGGATTACTAGTCAGGGGAGGATGCGGAACTACATTACTTACGCCATGAGCTTGCTTCAGGAAAAAGGTTCTAATGAAATTGTTTTCAAAGCAATGGGGAGAGCTATCAACAAAACTGTAACTATTGTGGAGTTGATCAAGAGGAGAATTGTGGGTCTTCACCAGAATACATCAATTGGATCCACTGACATCACTGATACATGGGAGCCACTAGAGGAAGGCCTCCTTCCTTTGGAGACAACAAGGCATGTGTCAATGATAACAATAACCCTCTCTAAGAATGAACTTGATACATCATCTGTGGGGTATCAGCCTCCATTACCAGCTGACCAGGTGAAGGCGTCCACAGATTTTGATTATGAAGGAGAGGGTTCACCTAATGGCCGTGTTCGGGGACGTGGTGGCCGTGGCAGGGGAAGGGCCAGAGGTAATGGTTTTATTTCAGCTGATTATGAGGATGGAGGTTGGGATCGTAATAGGGGGAACCCTAGGGGAAGGGGTAGAGGAAGAGGACGTGGCTTCCGTGGTCGTGGAAGGGGAGGGTACAATGCCTATATTGATATGCAGCAAGATGGAGGATACAACCAAGATGCACCTCAAGGCCGTGGTCGTGGCCGTGGCAGGGGGGGAATTCGCGGAAGGGGTCGTGGCTTTAGATCCAATGGGCCGATCCAGGCAGCTGCTTGA 750 0.4973 MDRYQKVEKPRAETPIDENEIRITSQGRMRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKNELDTSSVGYQPPLPADQVKASTDFDYEGEGSPNGRVRGRGGRGRGRARGNGFISADYEDGGWDRNRGNPRGRGRGRGRGFRGRGRGGYNAYIDMQQDGGYNQDAPQGRGRGRGRGGIRGRGRGFRSNGPIQAAA. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04101 249 Pfam Alba 19 83 IPR002775 GO:0003676
Seca8g04101 249 PANTHER RIBONUCLEASE P SUBUNIT P25 1 241 - -
Seca8g04101 249 Gene3D - 14 118 IPR036882 GO:0003676
Seca8g04101 249 MobiDBLite consensus disorder prediction 138 249 - -
Seca8g04101 249 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Seca8g04101 249 FunFam DNA/RNA-binding protein Alba 1 15 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04101 Seca-Chr8 117406796 117410760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04101 - - gmx:100818986 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04101 8 117406796 117410760 Seca8g04101 8 117406796 117410760 ECH