Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04095 ATGGCAGCCATTGCTACAGTGATGCTTATTATAGCAGTGTCCTTCATTTCTCTTGCGAATGCACTGAGTGTGAATTACTATGACCACACGTGCCCTCAGGTAGAGTCCATCGTCGCTGGTGCTGTACATAAAGCAACCAAGAATGACAAAACTGTCCCAGCTGCTCTGCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGGCTCTGTTCTGCTGGAATCAAAAGGGAAAAATAAAGCAGAAAAGGATGGTCCTCCCAATATTTCATTGCATGCATTCTATGTCATTGACAACGCTAAGAAAGCAGTGGAAGCTGTTTGCCCCGGGGTCGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTACTCTGTCCGGAGGGCCCACTTGGGATGTACCGAAAGGAAGAAAGGATGGAAGAATATCAAAGGCCACTGAAACCAGACAATTGCCAGCTCCCACCTTCAACATCTCCCAACTACAACAAAGCTTCTCTCAGAGAGGCCTTTCCTTGGATGATTTGGTAGCCCTCTCAGGAGGTCACACCCTCGGGTTCGCTCACTGTTCATCCTTCCAGAACAGAATCCACAATTTCAGCCCCAAACAAGACATTGACCCATCCATGAACCCATCATTCGCAAACAGCCTCCGAAGCATATGCCCCGCTCACAACAAAGTTAAAAATGCAGGTTCCTCATTGGATTCTAGTACCACCTGCTTTGACAATGCTTATTACAAGTTACTACTCCAAGGAAAAAGCATATTCTCTTCTGATCAAGCTCTGCTCACTCATCCCCACACTAAAGCATGGGTTTCCAAGTATGCCTATTCCCAAAAGGAATTTGAAAGAGCGTTTGTCAAGTCCATGATCAAGATGAGCAGCATCATCAACGGTGGAGGAGAGATCAGGCACGATTGTAAATTCGTTAGATGA 951 0.4585 MAAIATVMLIIAVSFISLANALSVNYYDHTCPQVESIVAGAVHKATKNDKTVPAALLRMHFHDCFIRGCDGSVLLESKGKNKAEKDGPPNISLHAFYVIDNAKKAVEAVCPGVVSCADILALAARDAVTLSGGPTWDVPKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSLDDLVALSGGHTLGFAHCSSFQNRIHNFSPKQDIDPSMNPSFANSLRSICPAHNKVKNAGSSLDSSTTCFDNAYYKLLLQGKSIFSSDQALLTHPHTKAWVSKYAYSQKEFERAFVKSMIKMSSIINGGGEIRHDCKFVR. 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04095 316 SUPERFAMILY Heme-dependent peroxidases 22 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 Gene3D - 25 315 - -
Seca8g04095 316 CDD secretory_peroxidase 22 315 IPR033905 GO:0004601|GO:0042744
Seca8g04095 316 FunFam Peroxidase 25 168 - -
Seca8g04095 316 Gene3D Peroxidase, domain 2 157 298 - -
Seca8g04095 316 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 Pfam Peroxidase 40 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 FunFam Peroxidase 157 298 - -
Seca8g04095 316 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Seca8g04095 316 PANTHER PEROXIDASE 25-RELATED 13 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g04095 316 ProSiteProfiles Plant heme peroxidase family profile. 21 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04095 Seca-Chr8 117287076 117290840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04095 7 316 Peroxidase AT5G42180 73.871 3.77e-176 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04095 K00430 - gmx:100820056 538.11