Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04089 ATGGCTCAGACTACACCGAATCACACACAAACCGTATCCGGATGGGCAGCACATGATTCTTCTGGCAAGATTACCCCATACACCTTCAAAAGAAGGGAGAATGGCGTTAACGATGTGACTATGAAGATCTTGTATTGTGGGATTTGCCACACTGACCTCCACCATGTTAGAAATGACTGGGGCATCACTATGTATCCTGTTGTACCAGGGCACGAGATCATTGGGGAGATCACCAAGGTGGGGAGCGATGTGAAGGGTTTCAAGGAAGGAGACAGAGTGGGAGTGGGGTGTTTGGCAGCTACATGTTTGGATTGTGAGTACTGCAACACCGATCAGGAGAACTACTGTGAGAAGTTGCAGTTTACATACAATGGAATTTTCTGGGATGGTAGCATCACCTATGGTGGCTATTCCAATATGCTGGTTGCAGATTACAGATATGTGGTACACATTCCGGCAAATCTGGCACTGGACGCAGCAGCTCCTTTATTGTGTGCTGGAATAACAGTGTTTAGTCCCTTGAAAGACCACAATTTGGTAACATCACCAGGGAAAAAGATTGGGGTGGTTGGTTTGGGAGGCCTTGGACATCTAGCCGTCAAATTTGGTAAGGCATTTGGTCACCATGTTACTGTCATTAGCACTTCTCCGTCCAAAGAAGCTGAGGCTAAGCAGCGTTTGGGAGCTGATGATTTCATTCTCAGCTCCAACCCTAACCAATTGCAGGCTGCAAAGAGAAGCCTAGATTTCATTTTGGACACTGTATCAGCAGAACACTCTCTCTTGTCCATCTTAGAATTGCTCAAAGTAAACGGCACTTTATTTATCGTTGGTGCACCGGACAAGCCATTCCAATTGCCTGCTTTTCCATTGATATTTGGTAACACTAACCTAAATTACCTGTGTATTTGCCCATTTGCTAATTGA 927 0.4542 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVNDVTMKILYCGICHTDLHHVRNDWGITMYPVVPGHEIIGEITKVGSDVKGFKEGDRVGVGCLAATCLDCEYCNTDQENYCEKLQFTYNGIFWDGSITYGGYSNMLVADYRYVVHIPANLALDAAAPLLCAGITVFSPLKDHNLVTSPGKKIGVVGLGGLGHLAVKFGKAFGHHVTVISTSPSKEAEAKQRLGADDFILSSNPNQLQAAKRSLDFILDTVSAEHSLLSILELLKVNGTLFIVGAPDKPFQLPAFPLIFGNTNLNYLCICPFAN. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04089 308 PANTHER ALDEHYDE REDUCTASE 7 298 IPR047109 GO:0016616
Seca8g04089 308 FunFam probable cinnamyl alcohol dehydrogenase 15 173 - -
Seca8g04089 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 300 IPR036291 -
Seca8g04089 308 CDD CAD1 14 298 IPR047109 GO:0016616
Seca8g04089 308 Gene3D - 16 165 - -
Seca8g04089 308 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Seca8g04089 308 Gene3D - 166 298 - -
Seca8g04089 308 SUPERFAMILY GroES-like 17 180 IPR011032 -
Seca8g04089 308 Pfam Zinc-binding dehydrogenase 194 298 IPR013149 -
Seca8g04089 308 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Seca8g04089 308 FunFam Cinnamyl alcohol dehydrogenase 166 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04089 Seca-Chr8 117187350 117191499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04089 7 295 Monolignol Biosynthesis Gene Families AT4G39330 56.401 4.63e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04089 K00083 - gmx:100820588 535.798