Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04086 ATGGTTACCACTTCTAAATCTTCTTCTAATCATCACTCGCCGACTAGTGCTCCATCATCGGCGCAGTCCGAGGACAGCAATAGCCCCAAGTTCCCGCGGGTAAATTTTCCTTCTCCGTGGGCTCAGGTTGTTCGTGGCGGCGAGCCGGAATCAACCACCGGCATTCACCAATCGCCGCCGTCATCCTCGTCTTCTTCGTCGTCCCTCACTACTGGCGCCGCCGACCAAGCGCCGCCGTCTGATTCTTCCCCAAACGCGGGTCCTTCTTCGCCGCCGGTCGATAATTCTAACACGGTCGCCGTTGTAGATAGCTCCGATGCTGGTGAGGACAATGCTGGTCGTTCTAAGAAACCCGTCGTTGTAGATAGCTCTGATGCTGGTGAGGGCAATGCTGGTCGTTCTAAGAAACCCGTCGTTGTAGATAGCTCTGATGCTGGTGAGGGCAATGCTGGTCGTTCTAAGAAACCCGTCGTTGTAGATAGCTCTGATGCTGGTGAGGGCAATGCGGGTCGTTCTAAGAAACCCGCTTGGAACAAGCCATCAAACGGCGCCGTCGATGCCGGACCTGTGATGGGTGCTGAATCCTGGCCTGCTTTGTCTTCCAAGCCATCAACCACCAAAGCTTCTGGGAAATTTCCAGGTGAATCGTCTTCCAAGGCCGCTGCCGATGGATCACAATCCACTTCTCAGGGGCCTGTAACTTCTCACTCACCTCAGAAACAAGGTACTAGTAATGCAAAACCTAATTCTGCAACAAATTATAATATGCCTAATAGGCAAAGATCGATGAGGCGGGTAGGTGGCAGCAACATTGGGTCTGGCCCTGCTCATAGCAACTTCTCCAACCCTCCCCCACCACCGCCACCTCCTCCCTTCCCTGTGTATCAGCTCCCTCCAGCTAGCTATGGTAATATGGTACCAGGTATCCCTGACCCTTCTCCAAGAGATTACCGCAACAATAATTGGGATACAAGACCATTAGTTGGGGGTTTTGTGCCTGCGATGAATGAACCGCGGGGTTCCAATCGAAGAGGTAATTATGGGTCCCATCCACGTGGAGATGGTTCCTATCATAATAATTATGGTGGCAGGCGTGATCAGGATCGCGGAAATTATGTGAATACTAGAGATACTCATGCACCTCAACCAAGGATGGCTCCAAGAGGATTATTAAGGCACCCACCACCTAGTACTGCTGCATTTGTGGGTCCTCAGCCTCTTGGACCCTTTGCAAATCCCATTGGTTTTCCTGAGTTCTATTACTTTCCAACAGTACCAATGGAACACTTTAGGGGCATGCCATTCTTCACGCCTAGCCCTTCTCCTGCACCATTCTTCCCTCCTGCAGAATCTCCTCTGTCCAATATGATAGTCAACCAAATTGATTATTACTTTAGTGATGCTAACTTAGTGAAAGATGAGTTTTTAAGGTCTAACATGGATGAACAGGGTTGGGTTCCAATTACTCTGATATCAAACTTCCCTCGACACCATAGGTTTGTTTTTGCTTTATGGAATATCTTTTCACAGGTTAGAAGTTTGACAAGCAACGTTCAGTCGATACTTGATTCGTTGAGAACCTCCACTGTTGTGGAAGTGCAGGGTGACAGGTTGAGGAGGCGTAATGACTGGATGAGATGGCTGCCCTCTGCTCAGCTTCGGGCTGATTCTGGTTCAATATCTCCTGGTGGATCAAGACAAAATAACCTGGCAGCTGATTTTCAGACTATCGCCCTGGAAGAAACAACTAACGATGAAGGTTCAACAGAGTCTTCCAGTCAGTCTCAACTCCCTAATGGTGGTGATGCTGCAGGGAACAGCAGTTAA 1827 0.4953 MVTTSKSSSNHHSPTSAPSSAQSEDSNSPKFPRVNFPSPWAQVVRGGEPESTTGIHQSPPSSSSSSSSLTTGAADQAPPSDSSPNAGPSSPPVDNSNTVAVVDSSDAGEDNAGRSKKPVVVDSSDAGEGNAGRSKKPVVVDSSDAGEGNAGRSKKPVVVDSSDAGEGNAGRSKKPAWNKPSNGAVDAGPVMGAESWPALSSKPSTTKASGKFPGESSSKAAADGSQSTSQGPVTSHSPQKQGTSNAKPNSATNYNMPNRQRSMRRVGGSNIGSGPAHSNFSNPPPPPPPPPFPVYQLPPASYGNMVPGIPDPSPRDYRNNNWDTRPLVGGFVPAMNEPRGSNRRGNYGSHPRGDGSYHNNYGGRRDQDRGNYVNTRDTHAPQPRMAPRGLLRHPPPSTAAFVGPQPLGPFANPIGFPEFYYFPTVPMEHFRGMPFFTPSPSPAPFFPPAESPLSNMIVNQIDYYFSDANLVKDEFLRSNMDEQGWVPITLISNFPRHHRFVFALWNIFSQVRSLTSNVQSILDSLRTSTVVEVQGDRLRRRNDWMRWLPSAQLRADSGSISPGGSRQNNLAADFQTIALEETTNDEGSTESSSQSQLPNGGDAAGNSS. 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04086 608 MobiDBLite consensus disorder prediction 198 278 - -
Seca8g04086 608 PANTHER LUPUS LA PROTEIN-RELATED 193 555 IPR045180 -
Seca8g04086 608 MobiDBLite consensus disorder prediction 328 367 - -
Seca8g04086 608 SUPERFAMILY "Winged helix" DNA-binding domain 445 549 IPR036390 -
Seca8g04086 608 Gene3D - 447 544 IPR036388 -
Seca8g04086 608 ProSiteProfiles La-type HTH domain profile. 447 550 IPR006630 -
Seca8g04086 608 Pfam La domain 457 526 IPR006630 -
Seca8g04086 608 MobiDBLite consensus disorder prediction 556 608 - -
Seca8g04086 608 MobiDBLite consensus disorder prediction 279 297 - -
Seca8g04086 608 MobiDBLite consensus disorder prediction 51 104 - -
Seca8g04086 608 MobiDBLite consensus disorder prediction 1 33 - -
Seca8g04086 608 MobiDBLite consensus disorder prediction 1 299 - -
Seca8g04086 608 SMART la 451 543 IPR006630 -
Seca8g04086 608 CDD LAM 455 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04086 Seca-Chr8 116989391 116994727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04086 K18757 - gmx:100785504 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04086 8 116989391 116994727 Seca8g04086 8 116989391 116994727 ECH