Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04085 ATGCATCAGTTATTGTTGAAGAGTCTAGCCACGATTATTTTGGCATTCTTTGCCAATATAGTTCCCATCGCTGCAGCAGCAAACAATTCAGTATACCCAGCATTGTTTGCATTTGGAGATTCAATCCTTGACACGGGAAATAACAACAACCTTCAAACATTGACTAAATGCAATTTTCCTCCATATGGAAGGGACTTCCCAGGAGGAATTGCTACAGGAAGATTTGGTGATGGGAAAGTTTTCTCAGATTTGATAGCGGGAGCACTAGGAATAAAAGAAACGTTACCAGCCTATTTGGACCGAACCTTACAGGCTGAAGACCTCACTACTGGGGTAAGTTTTGCTTCTGGAGGCTCAGGGAATGACAATCTGACAGCTAAAATAATATTTAATTATGAATGCTATTCTCAGGGAGTTTTATCACTAGACGCCCAATTGAGACTGTTCGAAGATTACTTTCAAAGGCTTCAAGCAATTGTTGGACGACAAAGAGCGCTTTACATCATATCGAACGGCTTGTATCTGTTTTCAGCAGGGAACAATGACATTGCCCTTACTTATTCTTTCACCTCAAGGAGAACATTGCTTTTCCCTACATATGCCAATATTTTAGTTGGATCCGCTTCAAATTTCCTCACGAGATTACATGAACTTGGAGCACGACGAGTGTGGGTTCTGAGTACATTGCCATTGGGATGCTTGCCTGGAGCTAGAACTACACTTGGTGGACCTTTTAGGCTGTGTGCTGAAATTCTCAATGGAGAAGCACAGATTTTCAATAACATGCTATCATCAGCGGTTTTTTCTATCAGAAACAGGCTTTCCAATTATGACATTAGATTCATTAATGTCTATGATCCTATGCTTAATATCATTCGGAATCCTGTAGGCTCAGGATTTATAAACGTGGTGACAGGGTGTTGTGGGACAGGGTCAGTTGAAATTGCAGCGTTATGTAACAGTTTCAGTTTTTCATGTCCAGTTCCTTCATCATTTTTTTTCTGGGATGCTGGTCATCCCACTCAGAGAGCTTATCAGCTCACTATCTCTGCTGTACTACAAAATAACAATGTTACAAGCCCCCCTTTAACTTCTTCTCCTTAA 1104 0.4085 MHQLLLKSLATIILAFFANIVPIAAAANNSVYPALFAFGDSILDTGNNNNLQTLTKCNFPPYGRDFPGGIATGRFGDGKVFSDLIAGALGIKETLPAYLDRTLQAEDLTTGVSFASGGSGNDNLTAKIIFNYECYSQGVLSLDAQLRLFEDYFQRLQAIVGRQRALYIISNGLYLFSAGNNDIALTYSFTSRRTLLFPTYANILVGSASNFLTRLHELGARRVWVLSTLPLGCLPGARTTLGGPFRLCAEILNGEAQIFNNMLSSAVFSIRNRLSNYDIRFINVYDPMLNIIRNPVGSGFINVVTGCCGTGSVEIAALCNSFSFSCPVPSSFFFWDAGHPTQRAYQLTISAVLQNNNVTSPPLTSSP. 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04085 367 Gene3D SGNH hydrolase 23 358 IPR036514 -
Seca8g04085 367 SUPERFAMILY SGNH hydrolase 169 353 - -
Seca8g04085 367 PANTHER GDSL ESTERASE/LIPASE EXL3 18 351 - -
Seca8g04085 367 CDD SGNH_plant_lipase_like 33 356 IPR035669 -
Seca8g04085 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 35 46 IPR008265 GO:0006629|GO:0016298
Seca8g04085 367 Pfam GDSL-like Lipase/Acylhydrolase 35 348 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04085 Seca-Chr8 116977548 116979205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04085 8 355 Pollen Coat Proteome AT1G75910 39.093 1.25e-69 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04085 - - aip:107646231 418.698