Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04084 ATGGCTCTGTTTATGCAGCTCACTAGTTCTCCAGTTATTACCTTGTTGTTGCTGATCCATTTCACAGTATTATTTACTGTATGCTACAGAACGAAGGCTTTGGTGAAACTTCCACCAAATGTTTCATTTCCAGCAGTGATAGCGTTTGGAGATTCGATCGTGGACTCAGGAAACAACAACAACATAAAAACATTGGTGAAGTGCAACTTCCCTCCTTATGGAAAAGATTTTCAGGGAGGAGTCCCAACTGGTCGATTTTGCAATGGAAAAATTCCTTCAGACCTATTAGTTGAAGAATTGGGCATCAAGGAGTTTTTGCCTGCATATTTGGATCCAAATCTAAAATCCAGTGATCTTGTTACCGGCGTCTGCTTTGCCTCCGGTGCTTCAGGATATGATCCTTTGACACCCCAAATAGCGTTGTGTATGCACTGTAATGATCAGTCAGTTATACCATTATCTGCTCAACTAGACATGTTCAAAGAATACATAGGGAAGCTGAAAGGCATTGTTGGAGAGGACAGAACAAACTTCATCCTAGCCAATAGTCTTTTTGTTGTGGTGGCAGGTAGTGATGACATTGCCAACACCTATTTTGTTGCTCGCGTGAGACAATTACAATATGACATTCCTGCTTACACTGACCTTATGCTGCACTCAGCCTCTAATTTTATAAAGGAACTACATATGCTTGGAGCTCGTAGAATTGCAGTACTCAGTGCACCACCGATTGGATGCGTGCCATCACAGAGAACTCTGGCTGGAGGGATAATAAGAGAGTGTGCAGACAAGTACAATGATGCAGCAAAGCTGTTCAACTCCAAACTGTCAAAGGAGCTAGATTCCCTTACCCACAACTTGCCCAATAGCAGGATAGTTTACATTGATGTCTACAACCCTCTACTTGATATCATTGTGAACTACCAAAAATATGGTTATAAAGTTGTGGACAGAGGTTGCTGTGGCACAGGTAAACTAGAAGTTGCAGTGTTATGCAACCCTTTGGATGCCACTTGTCCTGATGCTTCGGAATATGTCTTTTGGGATAGTTATCATCCTACCGAAGGAGTATACAGAACGATCATAACTCAAGTCCTTCAAAAATATCTGAGTCGATTGATCTGA 1125 0.4178 MALFMQLTSSPVITLLLLIHFTVLFTVCYRTKALVKLPPNVSFPAVIAFGDSIVDSGNNNNIKTLVKCNFPPYGKDFQGGVPTGRFCNGKIPSDLLVEELGIKEFLPAYLDPNLKSSDLVTGVCFASGASGYDPLTPQIALCMHCNDQSVIPLSAQLDMFKEYIGKLKGIVGEDRTNFILANSLFVVVAGSDDIANTYFVARVRQLQYDIPAYTDLMLHSASNFIKELHMLGARRIAVLSAPPIGCVPSQRTLAGGIIRECADKYNDAAKLFNSKLSKELDSLTHNLPNSRIVYIDVYNPLLDIIVNYQKYGYKVVDRGCCGTGKLEVAVLCNPLDATCPDASEYVFWDSYHPTEGVYRTIITQVLQKYLSRLI. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04084 374 CDD SGNH_plant_lipase_like 44 369 IPR035669 -
Seca8g04084 374 Pfam GDSL-like Lipase/Acylhydrolase 46 361 IPR001087 GO:0016788
Seca8g04084 374 Gene3D SGNH hydrolase 36 370 IPR036514 -
Seca8g04084 374 FunFam GDSL esterase/lipase APG 35 370 - -
Seca8g04084 374 PANTHER GDSL ESTERASE/LIPASE EXL3 22 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04084 Seca-Chr8 116912233 116916414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04084 40 367 Pollen Coat Proteome AT1G75910 39.275 9.77e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04084 - - gmx:100793078 621.313