LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g04081	ATGATTTTTTTCATGAAGCTCCCTTCTTCTTGTGCACCTTCTCTTCTGACTTCAATTTGCACAACACTTCTCCGATTGACACTGTTATTTGTTGTTTCTTGCAAAACAAAGGCTATTGTGAAACTGCCACCAAATGTTACGATTCCAGCAGTGTTGGTGTTTGGAGATTCTATCATGGATACTGGCAACAACAACAACAACATGAAAACACCAACTCGCTGCAATTTCGAACCATATGGAAAAGATTTTCAGGGCGGGATCCCAACTGGCCGATTTAGCAATGGAAAGGTTCCATCAGACATTATAGTTGAAGAATTAGGCATTAAAGAGTTTCTACCGGCATACTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACCGGTGTGTGTTTTGCATCTGGTGGTGCCGGATACGATCCTTTGACTTCACAAGTAGCGGTACGCATATTTTCAGCAACAAAATGTATATATAACCAGTCAGCAATATCGCTATCTGGTCAACTAAACTTATTCAAAGAATACATAGAGAAGCTGAAGGGACTAGTTGGAGAGGACAGAACAAACTTCATCATAACCAACAGTCTTTATCTTGTGGTATTAGGAAGCAATGACATTTCCAACACATACTTCTTGTTTCACATCAGACAAAAACAATATGATTTTCCTACTTACGCGGATCTTATTGTCAGCTCTGCTTCTAGTTTCTTCAAGGGAATATATGAACTGGGGGCAAGGAGGATTGGAGTATTCAATACGCCGCCAATTGGATGTGTGCCGTTTCAGAGAACAGTTGCTGAAGGAATAGCAAGAAAATGTGTGGAAAAGTATAACGATGCAGTGGTGGTATTTAACAATAAACTGTCAAAGGAGATTGATTCCATTAATCAGAACTTTCCAGATAGCAGGATTGTGTATATTGATGTGTACAACCCTCTGCTTGATATCATAGTAAACAATGAAAAATATGGCTATGAAGTCGGAGACAGAGGGTGCTGTGGCACAGGCACTGTTGAGGTTATGTTCTTATGCAACCGTTTGGTGCCCACCTGTCCCAACGTTTCGGAGTATGTGTTTTGGGACAGTTTTCATCCAACTGAAAGTGTATACAAAATGCTCATACTCCCAACTATACCAAAATATATATACCAGTTCGAGTGA	1158	0.4033	MIFFMKLPSSCAPSLLTSICTTLLRLTLLFVVSCKTKAIVKLPPNVTIPAVLVFGDSIMDTGNNNNNMKTPTRCNFEPYGKDFQGGIPTGRFSNGKVPSDIIVEELGIKEFLPAYLDPNLQPSELATGVCFASGGAGYDPLTSQVAVRIFSATKCIYNQSAISLSGQLNLFKEYIEKLKGLVGEDRTNFIITNSLYLVVLGSNDISNTYFLFHIRQKQYDFPTYADLIVSSASSFFKGIYELGARRIGVFNTPPIGCVPFQRTVAEGIARKCVEKYNDAVVVFNNKLSKEIDSINQNFPDSRIVYIDVYNPLLDIIVNNEKYGYEVGDRGCCGTGTVEVMFLCNRLVPTCPNVSEYVFWDSFHPTESVYKMLILPTIPKYIYQFE.	386

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g04081	385	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	51	62	IPR008265	GO:0006629\|GO:0016298
	Seca8g04081	385	Gene3D	SGNH hydrolase	41	375	IPR036514	-
	Seca8g04081	385	FunFam	GDSL esterase/lipase APG	40	381	-	-
	Seca8g04081	385	PANTHER	GDSL ESTERASE/LIPASE EXL3	30	373	-	-
	Seca8g04081	385	CDD	SGNH_plant_lipase_like	49	372	IPR035669	-
	Seca8g04081	385	Pfam	GDSL-like Lipase/Acylhydrolase	51	372	IPR001087	GO:0016788

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g04081	Seca-Chr8	116852259	116855779	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g04081	19	383	Pollen Coat Proteome	AT1G75910	37.669	4.81e-67	214

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g04081	-		-	gmx:100776769	541.962

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