Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04081 ATGATTTTTTTCATGAAGCTCCCTTCTTCTTGTGCACCTTCTCTTCTGACTTCAATTTGCACAACACTTCTCCGATTGACACTGTTATTTGTTGTTTCTTGCAAAACAAAGGCTATTGTGAAACTGCCACCAAATGTTACGATTCCAGCAGTGTTGGTGTTTGGAGATTCTATCATGGATACTGGCAACAACAACAACAACATGAAAACACCAACTCGCTGCAATTTCGAACCATATGGAAAAGATTTTCAGGGCGGGATCCCAACTGGCCGATTTAGCAATGGAAAGGTTCCATCAGACATTATAGTTGAAGAATTAGGCATTAAAGAGTTTCTACCGGCATACTTGGATCCAAATCTCCAGCCTAGTGAATTGGCCACCGGTGTGTGTTTTGCATCTGGTGGTGCCGGATACGATCCTTTGACTTCACAAGTAGCGGTACGCATATTTTCAGCAACAAAATGTATATATAACCAGTCAGCAATATCGCTATCTGGTCAACTAAACTTATTCAAAGAATACATAGAGAAGCTGAAGGGACTAGTTGGAGAGGACAGAACAAACTTCATCATAACCAACAGTCTTTATCTTGTGGTATTAGGAAGCAATGACATTTCCAACACATACTTCTTGTTTCACATCAGACAAAAACAATATGATTTTCCTACTTACGCGGATCTTATTGTCAGCTCTGCTTCTAGTTTCTTCAAGGGAATATATGAACTGGGGGCAAGGAGGATTGGAGTATTCAATACGCCGCCAATTGGATGTGTGCCGTTTCAGAGAACAGTTGCTGAAGGAATAGCAAGAAAATGTGTGGAAAAGTATAACGATGCAGTGGTGGTATTTAACAATAAACTGTCAAAGGAGATTGATTCCATTAATCAGAACTTTCCAGATAGCAGGATTGTGTATATTGATGTGTACAACCCTCTGCTTGATATCATAGTAAACAATGAAAAATATGGCTATGAAGTCGGAGACAGAGGGTGCTGTGGCACAGGCACTGTTGAGGTTATGTTCTTATGCAACCGTTTGGTGCCCACCTGTCCCAACGTTTCGGAGTATGTGTTTTGGGACAGTTTTCATCCAACTGAAAGTGTATACAAAATGCTCATACTCCCAACTATACCAAAATATATATACCAGTTCGAGTGA 1158 0.4033 MIFFMKLPSSCAPSLLTSICTTLLRLTLLFVVSCKTKAIVKLPPNVTIPAVLVFGDSIMDTGNNNNNMKTPTRCNFEPYGKDFQGGIPTGRFSNGKVPSDIIVEELGIKEFLPAYLDPNLQPSELATGVCFASGGAGYDPLTSQVAVRIFSATKCIYNQSAISLSGQLNLFKEYIEKLKGLVGEDRTNFIITNSLYLVVLGSNDISNTYFLFHIRQKQYDFPTYADLIVSSASSFFKGIYELGARRIGVFNTPPIGCVPFQRTVAEGIARKCVEKYNDAVVVFNNKLSKEIDSINQNFPDSRIVYIDVYNPLLDIIVNNEKYGYEVGDRGCCGTGTVEVMFLCNRLVPTCPNVSEYVFWDSFHPTESVYKMLILPTIPKYIYQFE. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04081 385 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Seca8g04081 385 Gene3D SGNH hydrolase 41 375 IPR036514 -
Seca8g04081 385 FunFam GDSL esterase/lipase APG 40 381 - -
Seca8g04081 385 PANTHER GDSL ESTERASE/LIPASE EXL3 30 373 - -
Seca8g04081 385 CDD SGNH_plant_lipase_like 49 372 IPR035669 -
Seca8g04081 385 Pfam GDSL-like Lipase/Acylhydrolase 51 372 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04081 Seca-Chr8 116852259 116855779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04081 19 383 Pollen Coat Proteome AT1G75910 37.669 4.81e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04081 - - gmx:100776769 541.962