Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04074 ATGAAGCCCCTTTCTTCTCATCCTCACCTTTTAACTTCCTTACTCCGTTTCATAACATTATTTGTTGTTTGCTGCAAAACAAAGGCTTTGGTGAAACTGCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCGATCGTGGATACAGGAAACAACAACAACAACTTGTTAACAACGGCACGGTGCAATTTCAAACCGTATGGGAAAGACTTTAAGGGAGGGATCCCAACTGGCCGATTTAGCAACGGAAAGGTTCCATCAGACCTCATAGTTGAAGAATTAGGCATCAAAGAGTTTCTACCAGCGTACTTGGATCCAAACCTCCATTCTAGTGAATTGGCCACTGGTGTATGCTTTGCATCCGGTGGCGCCGGATACGATCCTTTGACATCACAAACCTCGGTATGTATATTTACAGCATCAATTCTCTTTCCAAAATCAGCAATATCGCTATCCGGTCAATTAGACTTATTCAAAGAATACATAGAGAAGCTGAAGGGAGTAGTTGGAGAGGACAGAACAAACTTCATCTTAGCCAATGGTCTTTTTCTTGTTGTATTAGGCAGCAATGACATTTCCAACACATACTTCTTGTCTCGAATTAGACAAGTGCAATATGATTTTCCTGCTTACGCCGACTTTATGGTCAGCTCAGCTTCTAATTTCTTGAAGGAAATATATCAATTAGGAGCACGGAGGATTGCAGTATTCAGTGCGCCGCCAGTAGGGTGTTTGCCATTTCAGAGAACGGCAGCCGGAGGAATAGCAAGAAATTGTATAACAAAGTACAATGAGGCAGTCAAATTATTCAACAGCAAATTGTCAAAAGGGCTGGATTCTCTTTATAAGAACGATCCAAATAGCAGGATTGTTTATATTGATGTTTACAACCCTCTGCTTGACATCATTGCAAACTACCAAAAATATGGCTATAAAGTCGGAGACAGAGGGTGCTGTGGCACAGGCATTATTGAGGTTGTATTATTATGCAACCGTTTCGTTCCCACGTGTCCCAACCGTATGGAGTATGTCTTTTGGGACAGTTTTCACCCAACCGAAAGGGTTTACAAACAGCTCATAGCTCCTATTGTTCGAAAGTATATAAACGATTTCTTGTGA 1128 0.4149 MKPLSSHPHLLTSLLRFITLFVVCCKTKALVKLPPNVSVPAVLVFGDSIVDTGNNNNNLLTTARCNFKPYGKDFKGGIPTGRFSNGKVPSDLIVEELGIKEFLPAYLDPNLHSSELATGVCFASGGAGYDPLTSQTSVCIFTASILFPKSAISLSGQLDLFKEYIEKLKGVVGEDRTNFILANGLFLVVLGSNDISNTYFLSRIRQVQYDFPAYADFMVSSASNFLKEIYQLGARRIAVFSAPPVGCLPFQRTAAGGIARNCITKYNEAVKLFNSKLSKGLDSLYKNDPNSRIVYIDVYNPLLDIIANYQKYGYKVGDRGCCGTGIIEVVLLCNRFVPTCPNRMEYVFWDSFHPTERVYKQLIAPIVRKYINDFL. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04074 375 PANTHER GDSL ESTERASE/LIPASE EXL3 22 364 - -
Seca8g04074 375 SUPERFAMILY SGNH hydrolase 185 371 - -
Seca8g04074 375 FunFam GDSL esterase/lipase APG 31 371 - -
Seca8g04074 375 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Seca8g04074 375 Pfam GDSL-like Lipase/Acylhydrolase 42 363 IPR001087 GO:0016788
Seca8g04074 375 CDD SGNH_plant_lipase_like 40 364 IPR035669 -
Seca8g04074 375 Gene3D SGNH hydrolase 32 371 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04074 Seca-Chr8 116736603 116741823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04074 36 372 Pollen Coat Proteome AT1G75910 40.294 5.19e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04074 - - gmx:100776769 560.066