Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04069 ATGCGATTTGATTCCTATGAAGCTGGGGAGTCATTTTACCATAAATATGCTTCAGCTGTTGGCTTTATTGTTCGAGAGGATGACATGGGTAAAAACAAGTTGGGTGGTGAGGTTGTCATGAAAAGATGGGTTTGTAATGGAGAAGGCTTTCAGCAAAATATAGGGGATCCTGGTTCATTAACTAGAGTTAATTGTCCTGCTGCATTTTGCATACATGCTCACCGTGTCAGTCAAAAGTGGCTTGTAATAAAGTTTGTGGCAAAGCATACACATGAGTTGGTACCAACATGCAAACATCTTCAAGTGGCAGTGGCAGATAATTTCGAAAGAAAAGATGTTGAGTTTGTTTATTACATCAACCGAGTGTTGGACCTTTTAGAGCACATGACACTGATGGGATTCCACAATTGA 411 0.4015 MRFDSYEAGESFYHKYASAVGFIVREDDMGKNKLGGEVVMKRWVCNGEGFQQNIGDPGSLTRVNCPAAFCIHAHRVSQKWLVIKFVAKHTHELVPTCKHLQVAVADNFERKDVEFVYYINRVLDLLEHMTLMGFHN. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04069 136 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 101 - -
Seca8g04069 136 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04069 Seca-Chr8 116379285 116380207 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g04069 FAR1 5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04069 - - pvy:116145899 90.5077