Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03997 ATGTCATCAGCGAAATGCAGCAAAATCCGCCACATTGTTCGGCTCCGTCAGATGCTGCGACGGTGGCGCAACAAGGCACGCATGTCCGCGAATCGTGCACCGTCCGATGTGCCTTCCGGACACGTGGCGGTGTGTGTGGGCGCCAACTACACCAGATTTGTGGTGCGCGCCACGTACCTGAACCACCCTGTTTTCAAGAAGCTTCTAGTTGAAGCTGAGGAAGAGTACGGCTTCTCCAACCAAGGACCCTTGACCATCCCTTGCGATGAAGCGCTCTTCGAAGAGGCTCTCCGGTTCATCTCCCGGTCCGAATCGGGCAAATCGAACCGGTTCTTAAACCTCGAGATCGAAGATTTTCAGAGATACTGCCACGTGGGAATCAGGAGCAACCTTGACTTCTGGCCTGAATCTCGACCGCTCCTAACTGACAAAACCATTTGGTAG 444 0.545 MSSAKCSKIRHIVRLRQMLRRWRNKARMSANRAPSDVPSGHVAVCVGANYTRFVVRATYLNHPVFKKLLVEAEEEYGFSNQGPLTIPCDEALFEEALRFISRSESGKSNRFLNLEIEDFQRYCHVGIRSNLDFWPESRPLLTDKTIW. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03997 147 Pfam Auxin responsive protein 14 99 IPR003676 GO:0009733
Seca8g03997 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03997 Seca-Chr8 114746850 114747293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03997 4 141 Calmodulin-binding Proteins AT4G34750 53.846 1.22e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03997 K14488 - gmx:100782525 254.603