Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03966 ATGGAGGGGGAAGATATGAGGTCTGGGACGAAGAAGAAGAGATCCAAACCGGTTGAAATGGGTTTTGACTCGGATGACGATGAGCCTATTGGGGCTATGTTTAAGCTCAGGAGGTCCAAGAAGAAAGTGAGTCTGGCATCAGAGGGGTCTTGTAGGGATGATGCTATTAGGAAAAATGAGGATTTTGGGGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCAGGGATCTGAAGCAACCCCTACTTTGAATGCTTCTCTTGAGGGTCATGATGATGATTTGGTTGCTGGGGGATCCAGGAGCACCTCAAAGGATGAGAAAGGGGTAGCTTTGTTGCCTGGTGATGGCATGCAGCTGCAGCATTCTTCTGATCAGCATATGGAAGACTCCTTGTCTGCAATTTTCCATAAGGCACAATCTAATTCTTCTAGGAAATCCCGTGCCTCATCCAATTCAAAGCAGAAAAGAGGGATTCGGAATGTGGATAGTGGGTTGAGCCCTGGCTCCGAAAGTTTTCCGGTAACTGTAGATTCTGTGGTTGAAAGTAGATCTAGATCTTCTTCTGTCTCGAAGATAGTTAAGAGGAACCTGAAGTCTGCTCCATTTTCTTCAGTATCTGCAATGGATAATCAAAAGGATGGTGATGACTGTTTTCAAGAGGAATCCACCAAGGATACTTGTGATTCAAACATTCCAGATGAACCATTAGTTGACCACTCTCACTCAATCAATGTCTGTGATGGAGATAGGCAACAGTTATCTTGTTTACAATTTGAAGGTGTTTGTTGTGCTTCTGACCAAAAGGCTGCATTGCAGGAAATAATTCTCAATGATGGTTTGAATCAGCATTCTGCCGTCATACGAGATACTGAAATAATTGATACTGCCTCGCCCTCTGAAGTGGGTGAAGGGGTATGTGAATTTACTGAGGCTGGAGGGTTCGAGAATAGATTGACTGATGAATTAGAGCAAGTGTGTAATGATGCTTCAGAACGTGGCATTTCTACTTCTACTGGGAAAGAAATTTACTCAACTTCTTGTCAGACCAAGCCCTTGATTAAATCAACTGAAAATATATTGAATGAGAATAATTATATGGTTTCTGGAAAAGTTTGCCAGGAATCCCCGATTGATGGAGGTGTAAAATCAGAGACCGAGTTTGTTTCTGGTGGAAATTGCTTTGATTATAATGGTTTAGATGCAAATGCTAAAGTACGAGATTCGGTTGTAGGTTTTTCACCTGAAAAAAATGATGTAATTGTCAGTGGTAGTTTATCTCCTATGGTGCCTAATGAAGCTTATGAATCGGAATTGGGTGTCCAGTCAAATCAATCTAAGAACCCTTTGGAAATGTGTAATATTCCAAAATACTCTACTGCTTCGATTCTGAAATGCAGCTCGGTATTAGATCCAATTCAGTCTGATGGATCCTCTATACAATCTTCAATTCCAGATGAAAATGGAAAAACTGCAGATTATCATGCCTCTGTGTCTGATTTTGCTGACAATGATGGTAAGATATCAGGTATTCCACGTGCAACACGAAAGGCCAAAATGCGGAAGCATGGAGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAGTAAATGATAAAGCTCCAAGTGAAAGCCAAGTTGTTGTAGATGGTGAACGCACTCTTAGAACAAGAGTGAAGCATGATACCTCTTTGAATGCTGTTGAAGACTCTGAAAAAGTTGCAGTAGTAGCAGTATCTGCTGGGCTAAAAGCCCGTGCAGTTGGTCCGATTGAGAAAATAAAGTTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCAAGGAATATTTGGATTGCAGGAATCAGATCTTAAGTCTTTGGAGCAGAGATGTCACGCGTATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATACACATTCTGAGGATGAAAGTTCCCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATGTGGTTATATAAATGTGGGAATTGCCTCTCAGAAGGAGAATGTTGGAAATAGTGCAAGGTATAAGCTTGTGAAAGAAAAAGGTTTTGAGGGAAGTTCCACAGCTTCATTGGCTGACTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAAACTAAAATGTCAGATACTTCTATGGAGATGAATGATGGTCTAACAAAGGATTATGAAGACCTAACAACTGAAGCTACAGAAGGCACGAGGCATGTTAATGAAGCGGTGATGGATTTATCAAACATGACAGAACATGAAGAAAGAAAAGATTATGATTGCCAGGGAAATGTTGGTATTCTGGACGGAGTTAGTGAAACTATACATGTTATCAATAGTTCTGTTCCTTCTACCAAGTTTCCTGATTCTAGATTGACTTCTCTTGTGGCTACTGAGCAAAGCAATGAATCTGCCAGTGTTAAATTTGCCATAGGTGATCAGATAGATGATCCTCTGCAGTCTGATTTAGAGGGTAGAAAGAGAGTGATTGTCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGGCACTTGCAACGTCAGGGATTTCTTGTAACTGTACTTGAGGCTAGGAATAGGATAGGAGGTCGTGTATTTACAGATCGCTCATCTCTTTCTGTCCCTGTGGATCTCGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTAGCCACTGAGAGAAGGCCAGATCCTTCCTCAGTGATTTGTGCTCAGCTGGGCCTTGAGTTGACAGTGTTAAACAGTGACTGCCCTCTTTATGACATAGTGACAGGACAAAAAGTTCCTGCAGATTTGGATGAAGCATTGGAGGCTGAATACAATAGTCTTCTTGATGACATGGTACTGGTTGTTGCTCAGAAAGGTGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTTAAGATTCGCCGTATGGGATGCTTTGAAAGTAGTGAAGAAACTAAGCAGAATATTTCTGCAGATGGTCCTTTTGATTCCAAAAAGGAGAGTTCTGATGAACAAAAAGTTGTTGAGGAGATTTTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTAGAATATGGTTGCGCTGCTTTGCTTAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTCTATGGAGGATTTGGGGGGGCTCATTGTATGATCAAAGGAGGTTACAGCACTGTTGTTGAGTCTCTAGGAGAAGGGGTTGCTATTCACTTGAACCATGTAGTAACAAATGTGTCATATGATATCAAGGAACCTGGCCAGAATAATAAAGTCAAAGTTTCTACATCTAATGGCAGTGAGTTTTGTGGAGATGCTGTCCTCATTACTGTTCCACTTGGCTGCTTGAAGGCTGAAACTATACAATTCTCCCCCCCTTTGCCACAGTGGAAATGTTCTTCCATTCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGGTTTTGGAATTTCCTACTGTGTTTTGGGATGATGCTGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAAAAGAGGTCACTGTTTTATGTTCTGGAATGTCAGGAAAACGGTTGGGGCTCCTGTCCTTATATCATTAGTGGTTGGTAAGGCAGCCGTAGATGGTCAAAGTTTAAGCTCTTCTGATCATGTCAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGCTTCAGTTCCTGATCCTGTTGCATATGTTGTGACTGATTGGGGTAGGGATCCTTATAGTTATGGTGCTTACTCTTATGTTGCGGTTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGGCCAGTGGATAATTGTTTGTTTTTTGCTGGTGAAGCAACCTGCAAGGAGCACCCTGATACTGTTGGTGGTGCAATGATGAGTGGACTACGGGAAGCTGTCCGCATAATTGACATATTGAACACCGGAAATGATCATACTGCAGAGGTGGAGGCACTGGAAGCTGCACGGGGACAGTTAGACACTGAAAGGGATGAAGTTAGGGACATAATAAAGAGACTTAATGCAGTTGAGCTTTCTAACATGTTGTACAAAAACTCTTTAGATGGTGCTCAAATCTTAACCCGGGAAGCTTTATTAAAAGAAATGTTCTTCAACACAAAAACCAATGCGGGGCGCTTGCATGTGGCCAAACAATTGTTAAGTCTTCCTGTCGGAAACTTGAAGTCCTTTGCTGGAAGTAAAGAGGGGCTAACTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATAGTACCCAACTCTTGAGGCACTGTTTGCGTCTTCTTGTACGCGTGTCAACTGATCTAGTTGCTGTACGCCTATCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTCTTCCGCAAGGAAAAAGCTTCTAATGGAGGATTGAAGTTGTCAAGACAAGCAACTGCTGTAGATTTATCAAAGAGAAAATCTATAAAAGATTCAGCCTCAGGAAAGCCTCCTATAAGCACACATCAGGGTACCATTGAAAATAAAGGAGGCTTGCTGAATCCTACATCTGCTGGAAGCAATTCACCCACCACACATGTGAAGAAATTGCACAACAAACAAGGAAAACAACAAGCTGCTTATGACTCGAGGCACGAGGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAAAGTAGTTACCGAGAAGGAAGATAAGCACTGTGTTATGTCTGAAGAAGAAAAGGCTGCTATAGCTGCTGCAGAAGCTGCCCGTGCAAAAGCAATTGCTGCTGCTGAGGCATATGCTTCTGCAGAAGCCAGGGGCAATACGCTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGGGAGCAGTATTCACAAAATGATGAGTGTGATAGTAGAAAAAAGTGGTCTGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGGGTTAGGGACTGGTCTGTTGATTTCTCTGCTGCTTGTGTTAACCTTGATAATTCTAGAATGCCAGTTGATAACCTCTCACAGAGGAGTCACTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGTGGACAGCAATATATATACAAAAGCTTGGATTGACACAGCTGGTGGCGTGGCAATAAAAGACCATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAATCCAACCATTCATTTGAAGGATGAGGAGGATTCAAATGCCTATTCAAAGTTACCCAGCTGGAAGCATGATGGTATGGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCCTTAAAAAGTCAGTCCCGAGGGGCAGATCATATTAAACAGGCTGTTGTTGACTATGTTGCATCACTACTTATGCCCCTTTATAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGTTTAAGTTTCAGGTCATGGAGCAAGCAACGGATGCAGAAAAAGCCATGACTGTTCACGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGTTCCTTTGTGGATATATTGATCGAGAGACATATGGCAACGAAACCAGATATGAAATCTTAA 5730 0.4218 MEGEDMRSGTKKKRSKPVEMGFDSDDDEPIGAMFKLRRSKKKVSLASEGSCRDDAIRKNEDFGGMDDTLASFRKRLKGPKRDQGSEATPTLNASLEGHDDDLVAGGSRSTSKDEKGVALLPGDGMQLQHSSDQHMEDSLSAIFHKAQSNSSRKSRASSNSKQKRGIRNVDSGLSPGSESFPVTVDSVVESRSRSSSVSKIVKRNLKSAPFSSVSAMDNQKDGDDCFQEESTKDTCDSNIPDEPLVDHSHSINVCDGDRQQLSCLQFEGVCCASDQKAALQEIILNDGLNQHSAVIRDTEIIDTASPSEVGEGVCEFTEAGGFENRLTDELEQVCNDASERGISTSTGKEIYSTSCQTKPLIKSTENILNENNYMVSGKVCQESPIDGGVKSETEFVSGGNCFDYNGLDANAKVRDSVVGFSPEKNDVIVSGSLSPMVPNEAYESELGVQSNQSKNPLEMCNIPKYSTASILKCSSVLDPIQSDGSSIQSSIPDENGKTADYHASVSDFADNDGKISGIPRATRKAKMRKHGDMTYEGDADWEILVNDKAPSESQVVVDGERTLRTRVKHDTSLNAVEDSEKVAVVAVSAGLKARAVGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVSDTHSEDESSRSSLIREVYAFLDQCGYINVGIASQKENVGNSARYKLVKEKGFEGSSTASLADSEDGVSFIVGQTKMSDTSMEMNDGLTKDYEDLTTEATEGTRHVNEAVMDLSNMTEHEERKDYDCQGNVGILDGVSETIHVINSSVPSTKFPDSRLTSLVATEQSNESASVKFAIGDQIDDPLQSDLEGRKRVIVIGAGPAGLTAARHLQRQGFLVTVLEARNRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSVICAQLGLELTVLNSDCPLYDIVTGQKVPADLDEALEAEYNSLLDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMGCFESSEETKQNISADGPFDSKKESSDEQKVVEEILSPQERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGEGVAIHLNHVVTNVSYDIKEPGQNNKVKVSTSNGSEFCGDAVLITVPLGCLKAETIQFSPPLPQWKCSSIQRLGFGVLNKVVLEFPTVFWDDAVDYFGATAEERSKRGHCFMFWNVRKTVGAPVLISLVVGKAAVDGQSLSSSDHVNHALKVLRKLFGEASVPDPVAYVVTDWGRDPYSYGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDHTAEVEALEAARGQLDTERDEVRDIIKRLNAVELSNMLYKNSLDGAQILTREALLKEMFFNTKTNAGRLHVAKQLLSLPVGNLKSFAGSKEGLTVLNSWILDSMGKDSTQLLRHCLRLLVRVSTDLVAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLSRQATAVDLSKRKSIKDSASGKPPISTHQGTIENKGGLLNPTSAGSNSPTTHVKKLHNKQGKQQAAYDSRHEVSSSRSQGSIDKVVTEKEDKHCVMSEEEKAAIAAAEAARAKAIAAAEAYASAEARGNTLLQLPKIPSFHKFARREQYSQNDECDSRKKWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAVDSNIYTKAWIDTAGGVAIKDHHAIERWQSQAAAADSYFSNPTIHLKDEEDSNAYSKLPSWKHDGMANESSISQVTVNKEALKSQSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKFKFQVMEQATDAEKAMTVHEFLDFKRKNKIRSFVDILIERHMATKPDMKS. 1910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03966 1909 MobiDBLite consensus disorder prediction 221 239 - -
Seca8g03966 1909 Pfam Flavin containing amine oxidoreductase 846 1316 IPR002937 GO:0016491
Seca8g03966 1909 Gene3D - 944 1271 - -
Seca8g03966 1909 Coils Coil 1332 1352 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 1512 1586 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 1568 1583 - -
Seca8g03966 1909 FunFam Lysine-specific histone demethylase 1A 581 685 - -
Seca8g03966 1909 SUPERFAMILY FAD/NAD(P)-binding domain 835 1319 IPR036188 -
Seca8g03966 1909 SUPERFAMILY Homeodomain-like 581 677 IPR009057 -
Seca8g03966 1909 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1414 1498 IPR035441 -
Seca8g03966 1909 Gene3D - 838 1314 IPR036188 -
Seca8g03966 1909 ProSiteProfiles SWIRM domain profile. 582 682 IPR007526 GO:0005515
Seca8g03966 1909 Pfam SWIRM domain 592 672 IPR007526 GO:0005515
Seca8g03966 1909 PANTHER FLAVIN MONOAMINE OXIDASE 836 1323 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 72 195 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 126 195 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 1521 1555 - -
Seca8g03966 1909 SUPERFAMILY FAD-linked reductases, C-terminal domain 1154 1265 - -
Seca8g03966 1909 PRINTS Adrenodoxin reductase family signature 860 873 - -
Seca8g03966 1909 PRINTS Adrenodoxin reductase family signature 837 859 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 212 239 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 1 30 - -
Seca8g03966 1909 MobiDBLite consensus disorder prediction 993 1013 - -
Seca8g03966 1909 Gene3D - 581 685 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03966 Seca-Chr8 114155367 114169098 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Seca8g03966 Amino_oxidase 8.2e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03966 - - gmx:100779479 2833.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03966 8 114155367 114169098 Seca8g03966 8 114155367 114169098 ECH