Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03948 ATGGCTGATTCAGGCTCAGCCTCTTCCAAGAGAATGTGGTGCTCCATCCCTGAAAGGCTTCAGCTGCATGCGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGTTTCCATGTCGTCTCAAGAGCTGCACTTAACATGGGCGTTAGCAAGCTTGTTTTCCCTGTCTATAGGAACATCATTGCTTTGCTTCTGCTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGGCCAGCGATTACTTTAAACTTCCTCTGCCAATTCTTTCTTCTCGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGCTTGGATAACACATCCCCTACCTTCGCATCAGCAATACAGAATTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATATTAAGAAATGTATATGCAATTTATTTCAGGATAGAGCAAGTGAGACTGAACAGAAAAGATGGGTTGGCTAAGGTGGCAGGAACCATATTTTGTGTTGCAGGGGCAACTGTGATTACACTTTACAAAGGTCCAACAATATATAGTCCATCATCTAGTAATGATCATCATCTAACTAGCATCAGCAGCAGCATCAACACAACACCAGAATTTGACTTTTGGACACTCTCACTGGGAGATGCAAATGGGAAGAACTGGACCCTTGGCTGCATCTACCTCATTGGGCATTGCTTGTCTTGGTCTGCTTGGCTTGTGTTGCAAGCACCTGTCCTCAAGAAGTACCCTGCTCGCCTCTCTGTCACTTCCTACACATGCTTCTTTGGACTCTTACAATTTCTGGTTATTGCTTTGGCCTTTGAAAGAGACGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATACGCGGGAGTGGTGGCATCCGGAATTGCCTTCGCAGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAGCCTGTTCAGACTTTTGTTGTCGCTATTATGGCTTCTATTGCTTTAGGAGAAGAGTTCTACTTGGGCGGGATCATTGGGGCAGTGTTGATTGTAGTGGGACTATACCTTGTGTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAAAGGAACAACTTGCTATTGCATCCACTGCAGAGCATAGCATCATCAGGCCCGCAAGCCACGCCAAAGCAGCACTCACTCAGCCACTCCTCTCTTCATCAACAGAAAATGTCTGA 1215 0.4626 MADSGSASSKRMWCSIPERLQLHAAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLCQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRNVYAIYFRIEQVRLNRKDGLAKVAGTIFCVAGATVITLYKGPTIYSPSSSNDHHLTSISSSINTTPEFDFWTLSLGDANGKNWTLGCIYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALAFERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKFAKEQLAIASTAEHSIIRPASHAKAALTQPLLSSSTENV. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03948 404 PANTHER WAT1-RELATED PROTEIN 24 369 IPR030184 GO:0016020|GO:0022857
Seca8g03948 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 174 - -
Seca8g03948 404 Pfam EamA-like transporter family 26 133 IPR000620 GO:0016020
Seca8g03948 404 Pfam EamA-like transporter family 219 357 IPR000620 GO:0016020
Seca8g03948 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03948 Seca-Chr8 113468400 113471552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03948 1 404 Nodulin-like Gene Family AT1G75500 73.529 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03948 - - gmx:100792395 660.218