Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03925 ATGGAAGACTACATTGCAAAGACAATTATTGTTGGAACTGTTTCATGGACATCAGCTTTTCTTGTAGTGAGGAGAATCTTTCCCAAGCGGTCTTTTGATTTCTGTAACAGAATTGTCTCGACGATCCATGCAATTTTAGCAGTAACATTGGCTTCACTCTCTGTTGAAGATTGGAAGTGTCCAATCTGTCCTGTGGCCTCAAAGTCTTCCCATAAACAGATGCAAGTTCTGGCAGTGAGTGTTTCTTATCTCATTTATGATCTGGTGTGTTGTCACTTTGGGGAAAGAGTCAGTTTGGACAACACTATCCACCATTTGGTAAGCATTGTTGGTATTGTAGCAGGTCTATGCTATCAAAAGGTAATTATTTCTCACTCTCAGATTGTTTATTTAGATTCTAGCTAG 405 0.3926 MEDYIAKTIIVGTVSWTSAFLVVRRIFPKRSFDFCNRIVSTIHAILAVTLASLSVEDWKCPICPVASKSSHKQMQVLAVSVSYLIYDLVCCHFGERVSLDNTIHHLVSIVGIVAGLCYQKVIISHSQIVYLDSS. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03925 134 ProSiteProfiles TLC domain profile. 29 134 IPR006634 GO:0016020
Seca8g03925 134 PANTHER TRANSMEMBRANE PROTEIN 136 1 120 IPR042512 -
Seca8g03925 134 Pfam TLC domain 33 126 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03925 Seca-Chr8 112977266 112980240 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03925 - - pvu:PHAVU_001G011500g 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03925 8 112977266 112980240 Seca8g03925 8 112977266 112980240 ECH