Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03921 ATGGCCTCATCCAGTGGAAACTCGAGTGTGTCCACTAAATTCCTGCAGAGCTCTGGCTCAGAGGAGGATTTGCAGGTTCTGATGGATCAAAGAAAGAGGAAGAGAAAGCAATCCAACCGTGAATCAGCAAAAAGATCTCGGATGAGAAAACAGAAGCATTTAGATGATCTCATTGCTGAAGTGGACAGGCTCAGAAAGGAAAACAGTGAAATCTTCACAAGAGTGAACATCATAGCCCAGAAATATGTGGAGGTTGAGAAAGAGAATTGCATTCTGAGGGCCCAGATGGGTGAACTTAGCCAGAGCCTAGAATCTCTGAATGGTATCATCAACCTCATCAACATAAGCTCTGGGGTCTACCAAACAGATTGCTATCTAACAACTGCAGATTATTTCATGAATCACTTGAACATGCCTTATCTTAATCAACCAATTATGGCCTCTGCAGATATGTTTCAGTGGTGA 465 0.428 MASSSGNSSVSTKFLQSSGSEEDLQVLMDQRKRKRKQSNRESAKRSRMRKQKHLDDLIAEVDRLRKENSEIFTRVNIIAQKYVEVEKENCILRAQMGELSQSLESLNGIINLINISSGVYQTDCYLTTADYFMNHLNMPYLNQPIMASADMFQW. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03921 154 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Seca8g03921 154 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Seca8g03921 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 88 IPR004827 GO:0003700|GO:0006355
Seca8g03921 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 150 - -
Seca8g03921 154 MobiDBLite consensus disorder prediction 1 52 - -
Seca8g03921 154 FunFam BZIP transcription factor 29 81 - -
Seca8g03921 154 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Seca8g03921 154 Coils Coil 47 74 - -
Seca8g03921 154 Pfam bZIP transcription factor 31 86 IPR004827 GO:0003700|GO:0006355
Seca8g03921 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Seca8g03921 154 Gene3D - 29 83 - -
Seca8g03921 154 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03921 Seca-Chr8 112953605 112954069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03921 27 154 bZIP Transcription Factor Family AT4G34590 51.095 5.19e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g03921 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03921 K25786 - cave:132189566 178.333