Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03908 ATGTTAAAATCTGTGGAACTCCCAGATTGTTTCTATCCTAGGCCACCAATTACCATCCCCCCAAGTGCTCCAACGCCAGAGCATTCTCTCCATCTCTCTAATATTGACCAGCAAAAGCTTCTCAGGTTCTCCATCAAGTACTTGTACTTCTTCAAAAAATCTGTGAGCTTGGATATCTTGAAGTCTTCTCTGTCCAGAGTTCTTGTGGATTATTACCCTTTAGCTGGGAGGTTGAGGGCCAGCAATAATAAGGATGATCGCAAGCTCGAGGTGGATTGCAATGGAGAAGGTGCTCTGTTTGCTGAGGCTTTCCTGGAAGCCACTGCTGAAGAATTGCTTGAATCTTCCAAGCTGCCAAACAAGTCATGGAGAAAGCTCTTGTATAAGGTGGATGCTCAGAGTTTCTTAGATGTTCCTCCCCTTGTAATCCAGGTGACAAGTCTCCGTTGCGGGGGAATGATCATCTGCACCGCGATCAACCACTGCCTATGCGACGGCATCGGCACGTCACAGTTTTTACACGCATGGGCCCAACTTGCCAAAGAGCCCAACACCAATTTGACAATTATACCCTTTCATGAACGACACGTGTTAAAAAGCCGAGATCCCCCACAGGTAAAGTTCCCTCACCCTCTGTTCACAAGAACAAATCTCACACCTACAGTGGACGTGTTCCAGTGGATGCAGTCACAACCACTAATGGCCACGTCATTCACCTTCGGAGCCTCTGAAGTGCTTCGCTTAAAGAAACAGTGCGTGCCATCACTAAAACAACGCATCACCACCTTTGAAGCCGTGGCGGCACACACGTGGCGCTCGTGGGTTCGATCACTGAGCCTATGTTCCACCCTCAACGTGAAGCTCCTTTTCTCCGTTAACGTTAGGAAAAAGATTAACCTCCCCGAAGGGTATTATGGGAACGGGTTTGTTCTAGCGTGTGCTGAGAGCACAGTGAAGGATTTGGTGGCTGCTGATAACTTGGGTCATGGTTTGAAACTGGTGCAACAAGCGAAGGCTAGTTTGGATGATGGTGAGTACATAATGTCCATGAATGATTTGTTGGAGGAGGAGAATGTTATGATAGATCTTTCAAGTAGCTTGGTTATATCACAGTGGTCGAGGTTAGGATTGGAAGATTTGGATTTTGGAGAAGGGAAACCATTGCATATGGGTGCTTTAACAAGTAGTGTTTATTGCTTGTTTTTACCGGTTGTTGGAGATGCTAATACGGTGAGGGTGCATGTGTCGGTACCGGAGAGTGTGGTAGAAAGCTTTCAGTATCACATGATGATAAAGGAGAGTTGA 1305 0.4659 MLKSVELPDCFYPRPPITIPPSAPTPEHSLHLSNIDQQKLLRFSIKYLYFFKKSVSLDILKSSLSRVLVDYYPLAGRLRASNNKDDRKLEVDCNGEGALFAEAFLEATAEELLESSKLPNKSWRKLLYKVDAQSFLDVPPLVIQVTSLRCGGMIICTAINHCLCDGIGTSQFLHAWAQLAKEPNTNLTIIPFHERHVLKSRDPPQVKFPHPLFTRTNLTPTVDVFQWMQSQPLMATSFTFGASEVLRLKKQCVPSLKQRITTFEAVAAHTWRSWVRSLSLCSTLNVKLLFSVNVRKKINLPEGYYGNGFVLACAESTVKDLVAADNLGHGLKLVQQAKASLDDGEYIMSMNDLLEEENVMIDLSSSLVISQWSRLGLEDLDFGEGKPLHMGALTSSVYCLFLPVVGDANTVRVHVSVPESVVESFQYHMMIKES. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03908 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 419 - -
Seca8g03908 434 Gene3D - 220 429 IPR023213 -
Seca8g03908 434 Pfam Transferase family 18 429 - -
Seca8g03908 434 Gene3D - 15 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03908 Seca-Chr8 112627258 112629692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03908 21 391 Monolignol Biosynthesis Gene Families AT5G48930 29.000 1.87e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03908 - - aip:107645267 623.239