LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g03869	ATGCATGATTTCTTCACTGCATATGATGAAGTCTATGATAGTTTTGGTGCAATATCCACTTCTTTTTGTGGAGGATATGTTGCAATGTTTATTGATAATAGCAGTGTGGGGTCCAATGTTTCCCATACTCGCATGTTGGACCACCAAGAGTTGAAGAGGCGTGCCAGTGATAACTACTCTGTTGCACACAGTGCCAATCGTCGAGGAAGAGTCACACACACTTTAAGTGATGATGATTTTGCTCAAGGAGTGTTTGGTAAACTCTATAGGGGCACTTTCAATGGTGAAGACGTTGCTATCAAAATCTTGGAGAGGCCTGAAAATGATCCAGCAAAGGCTCAGTTGATGAAACAACAGTTTCAGCAAGAAGTTATGATGCTTGCCACACTAAAGCATCCTAACATAGTTCGTTTCATAGTCGGCAACTTCAACTGCATGTCATCCGAGAAATGTGTAATTGATGGATTTAATGACGACTGTCTCGGTCAGTCATGTAATTGTGCTAAGAAGCTTCCTGATGTCCAGGACTTGGTTATCTGTCCTGCAGAGTCATCTTCAAGTTATGCTAAAATTCCAAGATAA	582	0.4124	MHDFFTAYDEVYDSFGAISTSFCGGYVAMFIDNSSVGSNVSHTRMLDHQELKRRASDNYSVAHSANRRGRVTHTLSDDDFAQGVFGKLYRGTFNGEDVAIKILERPENDPAKAQLMKQQFQQEVMMLATLKHPNIVRFIVGNFNCMSSEKCVIDGFNDDCLGQSCNCAKKLPDVQDLVICPAESSSSYAKIPR.	194

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g03869	193	Pfam	Protein tyrosine and serine/threonine kinase	79	140	IPR001245	GO:0004672\|GO:0006468
	Seca8g03869	193	SUPERFAMILY	Protein kinase-like (PK-like)	81	139	IPR011009	-
	Seca8g03869	193	Gene3D	Phosphorylase Kinase; domain 1	73	155	-	-
	Seca8g03869	193	ProSiteProfiles	Protein kinase domain profile.	74	193	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Seca8g03869	193	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	76	146	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g03869	Seca-Chr8	110327302	110335731	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g03869	14	139	MAP Kinase Kinase Kinase	AT4G31170	46.875	3.84e-35	124

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Seca8g03869		PK_Tyr_Ser-Thr	1e-06	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g03869	-		-	gmx:100788536	202.601