Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03821 ATGCTCATGCACCATCTTCTACTATTGGTGCTCTTCAATGTGCTGTTACTGTTTGCAGCAAGAGTGGTATACTCCATCATTTGGGTCCCATGGGTCATTTCTCGTCACTTTCATAAACAAGGCATAAGGGGTCCTTCCTACCGTCCGATCAAAGGGAACATTGATGAGGTCCTCAGGATGTACGCGGAAGTTCAATCAAAGCCAATGGCATTATGCCACGACACCCTTCAGCGTGTGTGTCCATTCTATCACAAGTGGTCTCGCATGTATGGGAAAACTATGATGTATTGGCACGGGTCAACCCCTAGGCTAGTTACATCCGACCCGGATTTCATCAAGGAAGTGCTTTTAAGAACGGGTGAATGTTTCGAGAGGATGGACCCGAATCCATCCATGAAACAGTTTTTTGGAGAAGGAATAATCTGGTTAAAAGGTGAGAAATGGGCTGTTCATAGAGCAATAGCTAACCAGGCTTTTAAAATCGAACGAGTTAAGTCTTGGATTCCAAAAATTATTGACAGCACAAAAGTAATGTTTTACAAGTGGGAGAATGAGAACAAAGGCATTGATGCATTTGAGATTGATGTAGATAAAGATCTCCAAGATCTTTCAGGTGACATTATATCCAGAGTCGCTTTTGGAAGTAGTTATGGAGAAGGGAAACAAATTTTTGAATTACTAGAACAACACTATCATCTTGTCTCTCTTGCTGCCAGAAGTATTTATTTTCCTGGGTTCAGGTTTCTACCTACCAAGAAGAACAGAGAAAGGAAGAGATTAGAGAAGAATTCCTATGAATTAATTCGAGTGTTGATTGACGATAGCCATAAAGTACAACAAGATTCAGAAAATTTGCTTTCTTTGTTGATGTCTTCTCACAAATTTATCAACAATGAGACACACAGGTTAGGGTCAAAGGAGATAATAGATGAATGTAAGAATTTCTATATGGCAGGAAAGGAAACAAGTGCGAATGCAATAAGTTGGGCACTCCTCCTTTTAGGCCTAAATCAAGAATGGCAAAGCAAAGCACGTGAAGAGGTACTTCGTGTTTTAGGATCCAACATGCCCCCAACTGCAAAAACATTAAGTGACCTGAAATTAGTGAATTTGATACTTCAAGAAACACTTAGACTTTACCCTATACCAGGGTCAATGGTGAGGCAAACTAGTAAAAGAGTTAAGCTTGGGAACATTGATATTCCTTTTGGTACACAATTATATTTGTCTGTCACTGCAGCTCATCATGATACTGAGTTATGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGATTTGTTGAGCCTAGAAAGCATTCAACTTCGTATTTTCCATTTGGATTAGGCCCCCACCATTGTGTGGGTCAAAATTTAGCTTTGGTTGAAATGAAGATTGTTCTTTCCATGATCATACAGAGATATTCTTTTGTTGTTTCACCAACATATGCTCATGGACCGATGTTGGTGATGGGTGTTTCACCTCAATACGGCATGCAAATTGTCTTTAAGAGATTATAA 1518 0.3966 MLMHHLLLLVLFNVLLLFAARVVYSIIWVPWVISRHFHKQGIRGPSYRPIKGNIDEVLRMYAEVQSKPMALCHDTLQRVCPFYHKWSRMYGKTMMYWHGSTPRLVTSDPDFIKEVLLRTGECFERMDPNPSMKQFFGEGIIWLKGEKWAVHRAIANQAFKIERVKSWIPKIIDSTKVMFYKWENENKGIDAFEIDVDKDLQDLSGDIISRVAFGSSYGEGKQIFELLEQHYHLVSLAARSIYFPGFRFLPTKKNRERKRLEKNSYELIRVLIDDSHKVQQDSENLLSLLMSSHKFINNETHRLGSKEIIDECKNFYMAGKETSANAISWALLLLGLNQEWQSKAREEVLRVLGSNMPPTAKTLSDLKLVNLILQETLRLYPIPGSMVRQTSKRVKLGNIDIPFGTQLYLSVTAAHHDTELWGEDALEFNPMRFVEPRKHSTSYFPFGLGPHHCVGQNLALVEMKIVLSMIIQRYSFVVSPTYAHGPMLVMGVSPQYGMQIVFKRL. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03821 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Seca8g03821 505 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 Gene3D Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 497 - -
Seca8g03821 505 SUPERFAMILY Cytochrome P450 41 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03821 505 Pfam Cytochrome P450 82 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03821 Seca-Chr8 109407731 109412845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03821 24 505 Cytochrome P450 AT1G75130 49.485 1.66e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03821 - - gmx:100789281 816.224