Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03813 ATGGCTTCCGACGGAGCAACCTCGGCGGCGACGAGTCGGAGGAAGCCTTCGTGGAGGGAGAGAGAGAACAACAGGAGGAGAGAGAGGAGAAGAAGAGCTATAGCAGCGAAGATATACACTGGACTTCGAGCTCAAGGGAACTACAACTTGCCTAAGCACTGTGATAACAACGAGGTCTTGAAAGCTCTCTGTGCAGAAGCTGGTTGGTTCGTTGAAGAAGACGGCACCACCTATCGTAAGGGTTGCAAGCCACCTCTGGCAAATGGTGCAGGCACCTCCTCTAGAAACACCCCATTCTCTTGTTCCCAGAATCCAAGTCCTGTTTCTTCATCTTTTCCCAGCCCAATTCCTTCCTACCAAGTTAGCCCTTCCTCTTCCTCTTTCCCGAGCCCTTTTCGTTTGGATGGGGACAATGCATCAAATCTTATTCCATATATTCGCAGTGCCATTCCCTCATCTCTCCCTCCACTGAGGATATCAAATAGTGCCCCTGTGACACCGCCTCTCTCCTCACCAACATCAAGAAATCCTAAACCAATTCCCACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCAGCTTCTGCCCCGGCTAGCCCTACACACCGTCACCTTCATACCCCGGCAACTATTCCGGAATGTGTTGAGTTTGAGTCTGATGCTTCACCTTCTGGCCAGTGGATGAAATTCCCACCATTCCCACCTTCTGCATCTGCAGTGGCAACTTCTCCAACCTTCAATCTTGTTAAATCTGCGGTTCAGCACAGTTTGCCTGATAGCTCAATGCAAGAGATGAGAAGTTCAGAAGAGTTTGGAGTGCAAGTAAAGCCTTGGGTTGGGGAAAAGATTCATGAAGTAGGATTGGATGATTTGGAGCTCACGCTTGGAAGTGGGAAGGGACGGAGTTAG 930 0.4957 MASDGATSAATSRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWFVEEDGTTYRKGCKPPLANGAGTSSRNTPFSCSQNPSPVSSSFPSPIPSYQVSPSSSSFPSPFRLDGDNASNLIPYIRSAIPSSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHRHLHTPATIPECVEFESDASPSGQWMKFPPFPPSASAVATSPTFNLVKSAVQHSLPDSSMQEMRSSEEFGVQVKPWVGEKIHEVGLDDLELTLGSGKGRS. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03813 309 MobiDBLite consensus disorder prediction 1 31 - -
Seca8g03813 309 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 308 IPR033264 GO:0003700|GO:0006351|GO:0009742
Seca8g03813 309 MobiDBLite consensus disorder prediction 89 122 - -
Seca8g03813 309 MobiDBLite consensus disorder prediction 157 180 - -
Seca8g03813 309 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 140 IPR008540 -
Seca8g03813 309 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03813 Seca-Chr8 109235808 109237396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03813 13 308 BZR Transcription Factor Family AT1G75080 69.841 4.55e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Seca8g03813 BES1_N 7.6e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03813 K14503 - gmx:100785743 432.565