Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03805 ATGTGGATTTATGTTATTGTTATTATACTTGTCCAAAATTTTGGGAATTATCAAATAACATTAAAGTACATTATTGCAGAAGGGAGGTTTTTCAACTGTTCCTTGAAGAAGATGGAAGATTGCAGGCCTCTCAAATCTGATAGTAGATTAAAGCACCGCCCTTTGACCCCTTTTAGGTTTTTAAGGGGTCTGATATGTATAGCGGTGTTTCTTTCTACAGCTTTTATGTGTCTAGTCTATTTGTCGCCAATGGCAGTTGTAGGATTGCGGCTTTTCAGCATACGTTGGAGTAGGAAAGCAGTGTCATTTTTTTTTGGACTTTGGCTATCTCTGTGGCCCTCTCTATTTGAAAAGATAAACAAAACTAAAGTAGTCTTTTCTGGGGATAGTGTTCCAATGAAGGAACGTGTTTTACTTATTGCTAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGGATCTTGCACTTCGAAAGGGAAGACTGGGATACATAAAATACATCCTTAAGAGCAGCCTGATGAAACTACCTATATTTGGTTGGGGATTTCACATTCTGGAATTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAACAAATATTGAACCAAAAGCTTTCAACATTTAAGGATCCTCAAGATCCTTTATGGCTGGCTATTTTTCCTGAAGGAACCGATTATACTGAACAGAAGAGTCAAAACAGTCAAAAATTTGCTGCTGAAGTTGGGCTCCCGGTGCTGACAAATGTATTACTTCCAAAAACAAAGGGGTTTCATGCTTGCTTGGAAGCTCTACGAGACTCGTTGGATGCAGTATATGACGTGACGATCGCATACAAGAATCAGTGTCCTTCCTTTCTGGACAATGTTTTTGGTGTTGATCCTTCAGAAGTGCACCTGCATGTTCGGCGTATTCCTGTAGAGGAGATACCAGCTTCCGAAACTAAAGCCTCTTCTTGGCTAATCGATACATTCCAGATCAAGGACCAATTGCTTTCTGATTTCAAGATTCAAGGCCATTTCCCTAACCAACAAAATGAAAAGGAAATTTCTACATTCAAGTGTCTGCTCGCTTTTACTATGGTAGTTTCTTTTACAGCCATGTTTACATATTTTACGTTTTTTTCTTTCATTTGGTTCAAGTTGTATGTAGGTCTATCTTGTGCATATCTTACTATTGCAACGCGCTTCAATTTTCAATTGATGCCTTTAACAAATTATATTCATGCACTCTATAACAGCAAGAAACAAAAGAGTGGATAG 1263 0.3848 MWIYVIVIILVQNFGNYQITLKYIIAEGRFFNCSLKKMEDCRPLKSDSRLKHRPLTPFRFLRGLICIAVFLSTAFMCLVYLSPMAVVGLRLFSIRWSRKAVSFFFGLWLSLWPSLFEKINKTKVVFSGDSVPMKERVLLIANHRTEVDWMYLWDLALRKGRLGYIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEQILNQKLSTFKDPQDPLWLAIFPEGTDYTEQKSQNSQKFAAEVGLPVLTNVLLPKTKGFHACLEALRDSLDAVYDVTIAYKNQCPSFLDNVFGVDPSEVHLHVRRIPVEEIPASETKASSWLIDTFQIKDQLLSDFKIQGHFPNQQNEKEISTFKCLLAFTMVVSFTAMFTYFTFFSFIWFKLYVGLSCAYLTIATRFNFQLMPLTNYIHALYNSKKQKSG. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03805 420 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 74 284 - -
Seca8g03805 420 SMART plsc_2 137 259 IPR002123 GO:0016746
Seca8g03805 420 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 54 396 - -
Seca8g03805 420 Pfam Acyltransferase 126 280 IPR002123 GO:0016746
Seca8g03805 420 Pfam Acyltransferase C-terminus 291 360 IPR032098 -
Seca8g03805 420 CDD LPLAT_LCLAT1-like 115 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03805 Seca-Chr8 108905079 108908065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03805 38 403 Miscellaneous Gene Families AT1G75020 66.940 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03805 K13513 - gmx:100808657 689.878