Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03782 ATGGCATCCTCTACTCTGTCCTCTTCATCTCCTTTCCTGCAACTAGAATTTCCATCTACAAGAAAACCCTCCAAATCACGTCCTTCATCCTTTGTTCCTCCGATCAGAGCCTCCGTGTCGGAGAAGCCATCGATTTCGGTTCCATCACGGTCAGTGGCAGCACCTGAAGCAAGCAAGCTTCCGATCCGAAAAATCCCCGGAGATTGTGGGATCCCATTTATTGGTCCCTACAAGGACCGTCTCGACTATTTCTACAACCAAGGCCGTGATGAGTACTTCAAATCCAGAATCCAAAAGTACCAGTCAACGGTGTTCCGCACCAACATGCCACCTGGACCTTTCATTGCTCAAAACCCAAACGTCATCGTTTTGCTCGATGGCAAAAGCTTCCCCATCCTCTTCGACGTCACTAAGGTCGACAAAAGAGACGTATTCACCGGAACCTTCATGCCTTCCACCGAACTCACCGGCGGCTACAGAGTTCTCTCTTACTTAGACCCTTCCGAACCCCGACACGGCCAGCTCAAGCGCCTCATGTTCTTCCTCCTCAAGTCTCGTCGCGATCAAGTCATCCCTGAGTTCCATTCCAGTTACACACAACTCTTCGAGACGCTCGAGAAGGAGTTAGCGCAAAAAGGAAAAGCCATTTTCGGCGACGCGAACGATCAAGCAGCGTTCAACTTCCTCACGCGTTCGCTTTACGGGTCCAACCCCGGGGACACCAAGCTTGGGCTTGACGGCCCAAAGCTGGTTCAGAAATGGGTTCTGTTTCAACTCAGTCCAATTCTTAAATTGGGCCTGCCCAAACTCATCGAAGACTCCATGATCCACAGCTTCCGCCTCCCTCCCGCTCTCATCAAGAAAGATTACCAGAGGCTCTATGATTTCTTCTACGAGTCTTCGGGATTCGTGCTTGACGAAGCGGAGCGTTTGGGCGTTTCGAGGGAGGAAGCTTGCCACAACCTGTTATTCGCCACGTGCTTTAATTCGTTCGGTGGGATGAAGATTTTCTTCCCCAACGTGCTGAAATGGATCGGGAGAGCAGGGGTGAAGCTCCACACGCAGCTTGCGAGGGAGATCAGGACCGCCGTGAGATCCGCCGGCGGTAACGTGACTATGGCGGCGATGGAGCAGATGCCGCTGATGAAGTCGGTGGTGTACGAAGCGTTCCGTATTGATCCTCCGGTGCCGTTGCAGTTCGGAAGGGCGAAGAGGGACATGGTGATCGAGAGTCACGAGCACGCGTTTCAGGTGAAGGAAGGGGAAATGCTGTTTGGGTTCCAACCCTTCGCTACTAAGGATCCTAAGATCTTCGACAGAGCTGAGGAATTTGTTGGGGACAGATTCGTGGGTGCCGAGGGAGAGAAGCTGCTTAAACACGTGCTTTGGTCTAATGGACCTGAAACCGAGACTCCAACCGTTGGTAACAAGCAATGTGCAGGCAAGGACTTTGTCATGTTGGTTTCTAGGCTTCTCATCGTCGAACTCTTTCTTCGTTATGATTCCTTTGAGATTCAAGTGGGATCTTCGCCTTTGGGTTCTTCCATTACACTCACTTCTCTAAAGAGAGCAAGCTTTTAA 1581 0.5136 MASSTLSSSSPFLQLEFPSTRKPSKSRPSSFVPPIRASVSEKPSISVPSRSVAAPEASKLPIRKIPGDCGIPFIGPYKDRLDYFYNQGRDEYFKSRIQKYQSTVFRTNMPPGPFIAQNPNVIVLLDGKSFPILFDVTKVDKRDVFTGTFMPSTELTGGYRVLSYLDPSEPRHGQLKRLMFFLLKSRRDQVIPEFHSSYTQLFETLEKELAQKGKAIFGDANDQAAFNFLTRSLYGSNPGDTKLGLDGPKLVQKWVLFQLSPILKLGLPKLIEDSMIHSFRLPPALIKKDYQRLYDFFYESSGFVLDEAERLGVSREEACHNLLFATCFNSFGGMKIFFPNVLKWIGRAGVKLHTQLAREIRTAVRSAGGNVTMAAMEQMPLMKSVVYEAFRIDPPVPLQFGRAKRDMVIESHEHAFQVKEGEMLFGFQPFATKDPKIFDRAEEFVGDRFVGAEGEKLLKHVLWSNGPETETPTVGNKQCAGKDFVMLVSRLLIVELFLRYDSFEIQVGSSPLGSSITLTSLKRASF. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03782 526 CDD CYP74 94 519 - -
Seca8g03782 526 FunFam Allene oxide synthase, chloroplastic 60 526 - -
Seca8g03782 526 MobiDBLite consensus disorder prediction 1 33 - -
Seca8g03782 526 MobiDBLite consensus disorder prediction 1 50 - -
Seca8g03782 526 SUPERFAMILY Cytochrome P450 61 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 PRINTS E-class P450 group IV signature 479 497 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 PRINTS E-class P450 group IV signature 379 395 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 Pfam Cytochrome P450 355 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 Gene3D Cytochrome P450 56 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g03782 526 PANTHER CYTOCHROME P450 26 60 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03782 Seca-Chr8 108407568 108409148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03782 7 526 Cytochrome P450 AT5G42650 63.846 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03782 K01723 - gmx:100037481 849.736