Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03778 ATGTATGATTCTTTGCAACCAGTGGTTTTGGTTGGTGGAATGCAGGATAGCTTTTTTGCAAGTTTCTTTCAGGGAGGGGGGATCACAATAGGTACTGGCTTGGCCTCTTACACAATTGATACCGTCCGAAGGTGGATGATGATGACATCCGGAGAAGCTGTAAAATACAATAGCTCTTTGGATGCATTCAAGACAATCATCGCAAAAGAGGGTACTAAGTCACTCTTCAAAGGTGCTGGTGCAAACATATTACGTACTGTTGCAGGTGGCAAAGATGCCAGCAAAGAATCTCCAGGTGCAAATTCTAGGCTACTGGCCACCATTGTAGTTGGTTCAGTCCTCGCAGGGGAGCTATCACTCATTTCTGCAATTGCAGCTGGGCAGTTTGTTAAATTTTTTGCTGTTGAGGCTGAGGATATCCCAATATTATCAACCAGCATTGCCTATGGGGTCTACATGGGAGTGACTAGCAACATAAAGTAA 483 0.4431 MYDSLQPVVLVGGMQDSFFASFFQGGGITIGTGLASYTIDTVRRWMMMTSGEAVKYNSSLDAFKTIIAKEGTKSLFKGAGANILRTVAGGKDASKESPGANSRLLATIVVGSVLAGELSLISAIAAGQFVKFFAVEAEDIPILSTSIAYGVYMGVTSNIK. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03778 160 SUPERFAMILY Mitochondrial carrier 3 88 IPR023395 -
Seca8g03778 160 Gene3D Mitochondrial carrier domain 1 90 IPR023395 -
Seca8g03778 160 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 87 131 IPR002202 GO:0004420|GO:0015936
Seca8g03778 160 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 86 127 IPR009029 GO:0015936|GO:0016616
Seca8g03778 160 Pfam Mitochondrial carrier protein 16 88 IPR018108 -
Seca8g03778 160 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 90 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Seca8g03778 160 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03778 Seca-Chr8 108197062 108197544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03778 1 89 Antiporters AT4G28390 77.528 2.60e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03778 K05863 - gmx:100785990 145.591