Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03776 ATGTTCACTAATTCACACCAAGTAATGAGAACCTTACTATCATCACCTTTGTCAGAGCCAGACCTCTCCTTAAACATTAGCCCTCCCTCTATTTCAGAAGCCAAAGATGTTGTGTGCTCATCAACCTCTGATTCAGGGAGTAGTGGAAGTGAGTTAAGCCATGAGAATAATGGGTTTTTCCATCGTCAACACACCACATTGAGATTAGGCTTTGCAGATTTGAATCATCATCCTCATTCACTACAAGGAGCCTCATCAAGAAACTTCAATCACCATCACCATCTCCAACCTCAAATCTATGGCCGAGATTTCAAACGAAATGCAAGGGTCAACATGAATGGTGTGAAAAGAAGTGTCAGAGCTCCTAGGATGAGATGGACAACCACCCTCCATGCCCATTTTGTTCATGCCGTTCAGCTTCTTGGTGGCCATGAAAGGGCAACACCAAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGTCATGGGCAGACAGATATAGGCTTAAACCCAAGACCAGGGAATAATATTGTTCATCATCATCTGCATGGACCATTAGCTTCTCACAGGTAA 642 0.433 MFTNSHQVMRTLLSSPLSEPDLSLNISPPSISEAKDVVCSSTSDSGSSGSELSHENNGFFHRQHTTLRLGFADLNHHPHSLQGASSRNFNHHHHLQPQIYGRDFKRNARVNMNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDIGLNPRPGNNIVHHHLHGPLASHR. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03776 213 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 187 IPR044847 GO:0000976|GO:0006355|GO:0010158
Seca8g03776 213 MobiDBLite consensus disorder prediction 35 56 - -
Seca8g03776 213 MobiDBLite consensus disorder prediction 178 199 - -
Seca8g03776 213 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 175 IPR006447 GO:0003677
Seca8g03776 213 FunFam Myb family transcription factor 120 178 - -
Seca8g03776 213 SUPERFAMILY Homeodomain-like 119 176 IPR009057 -
Seca8g03776 213 Pfam Myb-like DNA-binding domain 123 174 IPR001005 -
Seca8g03776 213 Gene3D - 121 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03776 Seca-Chr8 108149293 108153627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03776 18 199 G2-like Transcription Factor Family AT5G42630 59.375 5.24e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca8g03776 Myb_DNA-binding 6.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03776 - - gmx:100778242 287.73