Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03775 ATGGAAGCTCGAACGGAGCCAGTGAGATTGTTTTGCGCAACCTCCGTCTTCTCCGACAAAACACGAGTACATCTTCTCCATCAAAGCTCCTGCATGCAAGTATACTACCCAGTAGCCTCGTCTCTCCGTCAAAGCCTCCATCCCTGTCACCGTTTAAATCTTGAAGGCCCATGCATGCGAGTGACTTTCATGGATGACGAAGTGGAAATTGGATTGTCTCACATGAATAATGAAGAACATATTGGTGTGGATACTATTAGTTCAGAATCATGTTCCTTTAGTGATATGGAAAATTCAGAAAGTGGATATGATAATGATGAAGTAGAGACGTCAATAATTGTGACTAAAGAACAAGATGGGTATGAGCCAAAAATTGGAATGATATTTTCAAATGAAACTGAAGCTTTTGATTTCTATAATAAGTATGTTGAATTCACTGGTTTTGTTGTGAGAAAAGGCCAATATCAAAGATTGGCAAATGGAACCATAAGGCAAAGAACATTTGTTTGTGGAAAAGAGGGGTGTAGAAGGCCGAAGGACCCTTCACATGTGAACAAGGCTATGTTGAGATCACAAAGGCATGTAGATGAAGCACGTGCTAGTATGATTGAAGATATGGACAACACTGGCATAAAACCTTATGGTATGTATTCATATTTTGTTGAAGTTGCTGGAGGAGCCCAAAATGTTAAACTTTTAAAGGCTGATTGTGACCCTTTGAAAAAGGTCCATGTGTGGAGTATTTGCAAGGCCAAGGACGCTCTTCAGGATGGTTTCTCTATTAGGCTCGGCTCTGGTGATACTTCCTTGTGGTTTTCAAATTGGAGTGAACATGGTAGACTCTGTGACTTAGTTGATAATATTCACATTTCTGAAACTAATTTACAAGTTAAAGACATTTGGGCTAATGGTTCCTGGTGCTTTGACAACTTGGTTACTTCCATTCCAACAGAGGTTCTTGATATTATTCAAAACATTCATATTCCTATAGTTCCGGAAGTAGAAGCTTTGCGTAGATTTGTGGCTGGAGAGCGATGCGTTGCCCTGTCTCCTAACATCTCCATCACCTTCCCACGCCGCCGCAGTGTCGCCAGCTTCATCTTCTCTTCTGCACTACGTACGGAAACTGAAGTAATGAAAATCAACAATAGTCCTGATGATGGAAAGGTTTCTGCAATTGCACCCACTCCATCAGCTTTGGCCTCTCCTACAGTTCCACCGGCCATTGTACCTGCACTTTCTCCTATAAATGCTTCTCCAATGAAGGGAGCTTTTGGTATGGTGGGTTTGCCGGTTTGGCTATGGCAGTTCTTGTATTTGCTATTTCTAGCTATGCTTAATAAGGAAGTGTTCTCTTTGTTAGTAGTTTGGTTTGTGGGCCTTTTTGATTTTCTTCTTGAATGTATTGGAACTGATCAAGGGAATTTCTCTAACATGCCTTTGCTGGCTTTTAAAGCAACTTTCTTTGCCTGA 1473 0.4114 MEARTEPVRLFCATSVFSDKTRVHLLHQSSCMQVYYPVASSLRQSLHPCHRLNLEGPCMRVTFMDDEVEIGLSHMNNEEHIGVDTISSESCSFSDMENSESGYDNDEVETSIIVTKEQDGYEPKIGMIFSNETEAFDFYNKYVEFTGFVVRKGQYQRLANGTIRQRTFVCGKEGCRRPKDPSHVNKAMLRSQRHVDEARASMIEDMDNTGIKPYGMYSYFVEVAGGAQNVKLLKADCDPLKKVHVWSICKAKDALQDGFSIRLGSGDTSLWFSNWSEHGRLCDLVDNIHISETNLQVKDIWANGSWCFDNLVTSIPTEVLDIIQNIHIPIVPEVEALRRFVAGERCVALSPNISITFPRRRSVASFIFSSALRTETEVMKINNSPDDGKVSAIAPTPSALASPTVPPAIVPALSPINASPMKGAFGMVGLPVWLWQFLYLLFLAMLNKEVFSLLVVWFVGLFDFLLECIGTDQGNFSNMPLLAFKATFFA. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03775 490 Pfam FAR1 DNA-binding domain 137 188 IPR004330 -
Seca8g03775 490 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 64 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03775 Seca-Chr8 108075014 108087732 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03775 FAR1 6.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03775 - K17604 lang:109358024 90.5077