Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03765 ATGGCCATAACGGACTACTTTCCCGGCGACATCGCCTCCGATCTCTGGAAAATGCTAATAAACATTTCGCGCAAAACTCTCAATTGCAGAGCAAGCGCAGAGCAACTCATCACCTACATCCATGAAATCCTTCCTACAATCGAAGAAATCAAATACTCCGGCGTCGAGCTTCCGGCTCCTCGCCAGTCTCAGCTCAATCACCTCTCCGAGATACTACGCTCCGGCGTCGAGCTCTCCCACAAGGTCCTCTCCTCAAGCCGTTGGAACGTCTACAGGAACTTCCAGCTCGCCATGAAGATGGAGAAGCTCGAGCAGAGCGTCACCGAGTTCTTGCAAGTTCCCATGCAGGCTCATATACTTGCTGATGTGCACCACACCCGGTTCGAGATGGCCGAACGGTTCGACCGGCTCGAAGCATCGAACCGGAGGATGGAGCAGTTCTTTTGCGCCATGAAGATTGGGGTCGGCGGGGGTGGGTGGGTGGAGGAGGCTGTTAGGAGTATGCAGGAGGATGAGACTTGGATTGAGGGTAGTTCTGGAAATTTGAGTGTTGGTTTGGATTTTGGGAAGAGTAAGGTTAAGGAGATGATTTTTGGAAGACAGGATCTTTGGGTTGTTGGGATTTGTGGGATTGGTGGATCAGGGAAAACCACTCTTGCCAGAGAAGTCTGCAGAGATGAACAAGTTCAATGTTATTTCAAGGAGAGAATCTTGTTTCTGACTGTTTCTCAATCCCCAAATGTGGAGCAGCTGAGAGCTACCATCTGGGGACACATCATGGGCAGCAACGGAAGCTTTAATCCCAATTATGCTGTTCCGCAGTACATGCCACAATTTGAGTGTAGAAGCCAAGCTCAAATCCTGATTGTTCTGGATGATGTATGGTCACTCTCTGTGCTAGAGCAGCTTGTCTTTAGAATACCTGGTTGCAAATTCCTTGTGGTGTCCAGGTTCAGGTTCCCAATTTTTAATGCCACTTATGTAGTGGAATTGCTGGATGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTCAGCTGCTAATCAGAATTTAGTCAAGCAGGTTGTAGCTGAGTGTGGAAGGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCTCTGCGAGATCAGACTGAAATGTTTTGGTTAAGTGTTAAAACAAGGCTTTCTCAAGGCCTAAGCATAGGTGAATCCTATGAAGTTAACCTCATAGATCGAATGGCAATCAGTACTAATTACTTGCCTGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCAGAGGATAAAAAGATTCCTCTGGAAGTTCTTATCAATATGTGGGTTGAAATCCATGATATTCATGAAACGGAAGCTTATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTGAAAGAGGCACGTGCTGGGGGTATGTATAGCAGTTGCTTTGAAATTTCTGTTACTCAGCATGATATACTGAGAGACCTAGCTCTTAATTTGAGCAATCGTGGGAGCATCCATGGACGCCAAAGATTAGTAATGCCAAAACGAGAAGAGAATGGAAGACTCCCTAAAGAGTGGTCAAGATACATGGACCAACCTTTTGAAGCTCAAATTGTTTCAATTCACACAGGTGAAATGAAAGAATGGGACTGGTGTAAACTGGAATTTCCCAGGGCTGAAGTGCTGATTATTAATTTCACATCCAATGAATACTTCTTACCTCCATTCATTGAGAGAATGCCAAATTTGAGGGCATTAATAGTGATAAACCACAGTGCTTCATATGCTCATCTTCACAATGTTTCAGTTTTTAAGAATTTGACCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCATCCCCCATTTATCAGGCATTGTATTGGAGAACTTGGGCAAGTTATTTGTAGTCCTATGTAAGATTAACAATAGTTTGGAGGGGAAAGAAGCAAACCTGGCTCAACTATTCCCAAACCTCTCTGAGTTCACTCTTGATCATTGTGATGATGTCACTGAGTTGCCTTCAAGCATTTGTGGAATACAGTCACTCAAGAACTTGAGTCTCACCAACTGCCACAATTTGACCCAACTACCTGTTAAATTGGGCACTCTAAGATCTCTAGAGATCCTCCGTTTATATGCCTGTCCACATTTGGAAACACTTCCTCCTAGCATCTGTGACATGAGCAGATTGAAGTATATTGACATTTCTCAATGTGTTAACCTAGCATGCTTCCCTGAAGGAATTGGTAAATTGGTAAGCTTAGAAAAGATTGACATGAGGGAATGTCCAGTTAGGAAATTACCAAAATCTGCAGTATCATTGCAGTCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATCTTGGATATGGAAAGAAGTTGAGAAGGCCAAGCCAAATGTCCATATTCAAGTATCAGAGCAGCAATTTGATCTAGACTGGCTTAAAGAGTGA 2478 0.4403 MAITDYFPGDIASDLWKMLINISRKTLNCRASAEQLITYIHEILPTIEEIKYSGVELPAPRQSQLNHLSEILRSGVELSHKVLSSSRWNVYRNFQLAMKMEKLEQSVTEFLQVPMQAHILADVHHTRFEMAERFDRLEASNRRMEQFFCAMKIGVGGGGWVEEAVRSMQEDETWIEGSSGNLSVGLDFGKSKVKEMIFGRQDLWVVGICGIGGSGKTTLAREVCRDEQVQCYFKERILFLTVSQSPNVEQLRATIWGHIMGSNGSFNPNYAVPQYMPQFECRSQAQILIVLDDVWSLSVLEQLVFRIPGCKFLVVSRFRFPIFNATYVVELLDEEDALSLFCHHAFGQKSIPSAANQNLVKQVVAECGRLPLALKVIGASLRDQTEMFWLSVKTRLSQGLSIGESYEVNLIDRMAISTNYLPEKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDILRDLALNLSNRGSIHGRQRLVMPKREENGRLPKEWSRYMDQPFEAQIVSIHTGEMKEWDWCKLEFPRAEVLIINFTSNEYFLPPFIERMPNLRALIVINHSASYAHLHNVSVFKNLTNLRSLWLEKVSIPHLSGIVLENLGKLFVVLCKINNSLEGKEANLAQLFPNLSEFTLDHCDDVTELPSSICGIQSLKNLSLTNCHNLTQLPVKLGTLRSLEILRLYACPHLETLPPSICDMSRLKYIDISQCVNLACFPEGIGKLVSLEKIDMRECPVRKLPKSAVSLQSLQLVICDEEVSWIWKEVEKAKPNVHIQVSEQQFDLDWLKE. 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03765 825 Pfam NB-ARC domain 192 412 IPR002182 GO:0043531
Seca8g03765 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 432 IPR027417 -
Seca8g03765 825 Gene3D - 181 320 IPR027417 -
Seca8g03765 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Seca8g03765 825 PRINTS Disease resistance protein signature 205 220 - -
Seca8g03765 825 PRINTS Disease resistance protein signature 281 295 - -
Seca8g03765 825 PRINTS Disease resistance protein signature 734 750 - -
Seca8g03765 825 PRINTS Disease resistance protein signature 367 381 - -
Seca8g03765 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 823 IPR039203 GO:0050832
Seca8g03765 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 11 133 IPR008808 -
Seca8g03765 825 Gene3D - 412 503 IPR036388 -
Seca8g03765 825 SUPERFAMILY L domain-like 569 789 - -
Seca8g03765 825 Gene3D - 331 409 IPR042197 -
Seca8g03765 825 Gene3D Ribonuclease Inhibitor 542 809 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03765 Seca-Chr8 107837164 107840589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03765 202 755 WRKY Transcription Factor Family AT5G45050 22.982 1.16e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03765 - - aprc:113874975 1361.28