Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03763 ATGGACATGATTAATTATTACTGGGTGGGAATGCATTTGGCATTTGGCATTTTGCATTTGGTGGATATGGAGGCAGAAAATACTATACTTGTGGAAGAAAATGAAGAGCTTGAAAAATCTTTAGTTGATATTGATGAACGAATTCCAAAGGTTGGTATGATATTGGATTCTGAAGAGGAGCTTCATGTTTTTTATAAGAAATATGCCTATGAAGTTGGATATGGGGTTCAAAAAATTAGCACAAGAACGGATGGTAAAGTCAAATATTGTTCTCTTGGATGTTCCAAAGGAGGTAAATATGTAAGTAGAGCAAGTTCTTCTAAGTTTAGATTGTCTAGCAAAACTGAATGTCAAGCAAAAATTTTTGTGATTGTTCATAGCAGTGGAAATTGTACTATTTCTCGTGTTAATCTAGAGCATAATCATGTTTTAAGTCCAAAAAAATCAAGATTTCAAAGGTCCCATAAGAAAATGGATTGTTATTCAAAAAGGAGGCTTGAGTTAAATGATTGTGCAGGAATTCCAATGAACAAAAATTTTCATTCATTGGTAGTTGAAGCTAAAGGGTATGAGAACTTGAAATTTGGTGAGAAAGATTGTAGGAATTACATAGCAAAGGTCATGTACGAAATGTTTTTTTGGGCAAATGCAAGGTCCAAGGCAGCTTATGACTCATTTGGAGATGTTGTGTCATTTGATAGTACATATTTGATCAATAGATACAATATGCCATTTTCTCCTTTTGTTGGAGTGAACCACCATGGGCAATCCATCTTATTTGGATGTGGTTTACTATCAAGAGAAGACATAGATACATATGTATGGTTGTTCAAGTCATTTTTGGAATGCATGCGTGGGCGAGCTCCAAAAGCAATAATTACAGATCAATGTCGATCTATCCAAGCAGCAATAGCAAAGTTGATGACATGTTGTTACTTTGAAAAACAATTTCAAGAGGCCTATACCAATGTAATTTTTAAGTTGTTTCAAGATGAGTTGCGTGGTATACTCTGTAGGCATATAGCAAAGATTTTAATAGAAAGGGATGTGAAAGAGATCCCCTCTCGGTATATTCTTACAAGGTGGAGAAAGGATGTCAAGCATAGTCACTATCATGTGGTAAATTGTTATGATGATTTGGAGATTAGTGAGCATGTAATGGAATTTGATAAGTTGTGTGCTAACTTTTATGAGGCTGCACATATGGCCAATTCAAGAGAAAAGTATGAATTCTTTATGACATGGATAGATAAAGCAAAGGAAAAGCTTAAGGATAATATGAGTTGGGACCATAGTAGATAA 1302 0.3456 MDMINYYWVGMHLAFGILHLVDMEAENTILVEENEELEKSLVDIDERIPKVGMILDSEEELHVFYKKYAYEVGYGVQKISTRTDGKVKYCSLGCSKGGKYVSRASSSKFRLSSKTECQAKIFVIVHSSGNCTISRVNLEHNHVLSPKKSRFQRSHKKMDCYSKRRLELNDCAGIPMNKNFHSLVVEAKGYENLKFGEKDCRNYIAKVMYEMFFWANARSKAAYDSFGDVVSFDSTYLINRYNMPFSPFVGVNHHGQSILFGCGLLSREDIDTYVWLFKSFLECMRGRAPKAIITDQCRSIQAAIAKLMTCCYFEKQFQEAYTNVIFKLFQDELRGILCRHIAKILIERDVKEIPSRYILTRWRKDVKHSHYHVVNCYDDLEISEHVMEFDKLCANFYEAAHMANSREKYEFFMTWIDKAKEKLKDNMSWDHSR. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03763 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 311 424 IPR031052 GO:0006355
Seca8g03763 433 Coils Coil 20 47 - -
Seca8g03763 433 Pfam MULE transposase domain 229 308 IPR018289 -
Seca8g03763 433 Pfam FAR1 DNA-binding domain 64 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03763 Seca-Chr8 107797424 107799548 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03763 MULE 3e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03763 - - ecad:122587955 332.798