Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03745 ATGTTGTCAATAAAATTACTTTTGTGGTCTCTGTTTTTGGCAGGGTGCCACTTCGCCATCTCATGCAACGCCAACCAGCAGGCTGAATACCTCTACAACTTTATTCAATCACGGAGGTCTCACAAGCCCTCACATGGAGAAGAACCTTCAAGTGCTGAATATGGTGTGGATGCATATGTTGTTGAGCAACAATCTTCATCAGGGTCGATGGAAGCTGACAAGGTGAAGGCTTTGCCAGGACAACCCCAAGGGGTTGATTTTGATCAATACGCTGGCTATGTAACTGTGGATGCCAAGGCAGGGAGAGCACTTTTCTACTACTTTGTGGAATCACCTCACAATTCTTCCACCAAACCTCTTGTTCTATGGCTAACTGGAGGGCCCGGGTGCTCTTCCCTGGGGTATGGGGCCATGCAAGAACTGGGACCTTTCAGAGTCAACAGTGATGGAAGAACACTTTACAGAAATGAATACGCATGGAACAACGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTAGGCTTTTCATATTCAAACACTCCTTCAGATTACTCTAAAACTGGTGACAATAGCACAGCCTTGGATTCTTACACTTTCCTTCTAAACTGGCTCCAAAGATTTCCACAATATAAAACTCGAGATTTGTTCATAACTGGAGAAAGTTATGCTGGCCATTATGTCCCTCAGTTAGCTGACATTATTCTCTCAAACAATAAGCTAATAAAAAACCACACAATGATCAATTTGAAGGGGATAGCGATTGGGAATGGGTGGATAGATGATGTTATGTGTACAAAGGGAATGTATGACTATTTCTGGACGCATGCTCTGAATTCTGATGAAACCCATGAAGGAATTGAAAAACACTGTGACTTTGAGAAGGGTAACTTTACAAGTGAATGCTACAAATATCAAAGTATAGCTGATGATGAAGTTGGAAGTCTTGACATATATAACGTGTATGCTCCACCTTGCGATTCAGCTGCAATAAAAACTGGTGCCACTCCCTCCACTTACTCTTTCGACCCTTGTGCTGATGATTATACTAAGTCCTACTTAAATCTTGCTCAAGTTCAAGAGGCTTTCCATGCTAAAGCCTCAAAATGGTTTCCTTGCAGTGGAGTGGGATGGACTGATAGCCCTGCAACTATTCTACCCGCTATAAACCGGTTAATATCAAGTGGTATAAGCACCTGGATATACAGTGGTGATACAGATGGGCGTGTTCCTATAACCTCAACAAGGTATTCAATAAATACCTTAAAACTTCCAGTGGTTACAACATGGCGTCCATGGTACTCTGACAATGAGGTTGGAGGATATGTAGTTGGGTACAAAGGGCTCACATTCGTCACTGTAAGAGGAGCTGGCCACATGGTTCCAAGCTACCAACCACAGAGAGCATTAACAATGATCTCATTTTTCCTTCGTGGAGAACTCCCTCCTGAAACTTCCTCTTAA 1467 0.4294 MLSIKLLLWSLFLAGCHFAISCNANQQAEYLYNFIQSRRSHKPSHGEEPSSAEYGVDAYVVEQQSSSGSMEADKVKALPGQPQGVDFDQYAGYVTVDAKAGRALFYYFVESPHNSSTKPLVLWLTGGPGCSSLGYGAMQELGPFRVNSDGRTLYRNEYAWNNVANVIFLESPAGVGFSYSNTPSDYSKTGDNSTALDSYTFLLNWLQRFPQYKTRDLFITGESYAGHYVPQLADIILSNNKLIKNHTMINLKGIAIGNGWIDDVMCTKGMYDYFWTHALNSDETHEGIEKHCDFEKGNFTSECYKYQSIADDEVGSLDIYNVYAPPCDSAAIKTGATPSTYSFDPCADDYTKSYLNLAQVQEAFHAKASKWFPCSGVGWTDSPATILPAINRLISSGISTWIYSGDTDGRVPITSTRYSINTLKLPVVTTWRPWYSDNEVGGYVVGYKGLTFVTVRGAGHMVPSYQPQRALTMISFFLRGELPPETSS. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03745 488 Gene3D - 346 377 - -
Seca8g03745 488 Gene3D alpha/beta hydrolase 69 329 IPR029058 -
Seca8g03745 488 Pfam Serine carboxypeptidase 79 479 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 467 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 SUPERFAMILY alpha/beta-Hydrolases 75 481 IPR029058 -
Seca8g03745 488 Gene3D - 386 480 - -
Seca8g03745 488 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Seca8g03745 488 ProSitePatterns Serine carboxypeptidases, histidine active site. 450 467 IPR033124 GO:0004185
Seca8g03745 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Seca8g03745 488 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Seca8g03745 488 FunFam Carboxypeptidase 386 480 - -
Seca8g03745 488 FunFam Carboxypeptidase 69 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03745 Seca-Chr8 107378868 107384193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03745 352 481 Calmodulin-binding Proteins AT2G22960 30.370 1.18e-15 73.6