Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03731 ATGAGGCAATTGGTCTGTAACAGGCAGGGGGAAAGGAGTGAGAAACATTTAAATAGGAGGGATAGAATTAGGGAAGCTAAGGCCATTACTCGGACCAATTGTCTTGCAAGGCTTCGACTGTATTTAGATAATAATAGTGGTAAGTGGAGGGTTGGAATGTTTGAGTCACAACACAATCATGAGCTTACTCCTGCAAATATGGTTCATTTGATGCCTGCTTATCGTGGTTTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGGCTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGATTTTGTAAGAAGGACTTGTACAATCACATTGACAAGGAAAATGGGGCCAAAATAGAGGATGGAGATGCTTTTTGCTGCTTTGTGCTATCTTCAAGTAATTCTTTTATCAAGAGATATGTTCAAAGTAAAAATAGTCTGGTTGATTTTCTTCATAATTTTGAAAGAGCTCTGAATAAGTATAGGCACAATGAATTAGCTTCTGATTTTAAATCTACATACACCCAGCCAGTTCTGACAACTGCCTTGGAAAAGTATGAAGTTCATGCTTGTAATGTATACACGAGGAATAAGTTTTTTGAAATTAGAAAGGAAATTGAGAAAGTTGTTGCATTGAATATGATTGAAAGGTCTGAGGTAGGTAATATTGTGACAATGAAGATGAACAAATTTGGAAGTCCTAATTTTGTATACGTTGTTCTATTTGATAAGTCTGTTGGTAAGTTTGTATGTGATTATCGGTTATTTGAATTCCGTGGCTTACCATGTTCTCATATTTTTGGTGTTATGAAGCACGAACAAGTAGAGTCAATTCCCCCTTCACTGATATGCAAAAGGTGGACTAAGTTTACTAAGGTTGATTATATATCTGCAATTTATGCTGATTAA 945 0.363 MRQLVCNRQGERSEKHLNRRDRIREAKAITRTNCLARLRLYLDNNSGKWRVGMFESQHNHELTPANMVHLMPAYRGLSAADKAQVNSLHLYGVRTCHIMGLIMGQKGGHSDLGFCKKDLYNHIDKENGAKIEDGDAFCCFVLSSSNSFIKRYVQSKNSLVDFLHNFERALNKYRHNELASDFKSTYTQPVLTTALEKYEVHACNVYTRNKFFEIRKEIEKVVALNMIERSEVGNIVTMKMNKFGSPNFVYVVLFDKSVGKFVCDYRLFEFRGLPCSHIFGVMKHEQVESIPPSLICKRWTKFTKVDYISAIYAD. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03731 314 PANTHER OS01G0519700 PROTEIN 156 306 - -
Seca8g03731 314 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03731 Seca-Chr8 107109178 107110754 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g03731 FAR1 1.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03731 - - tpra:123910662 205.297