Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03714 ATGTCTGCAAAGAGTGAACACCAAACCGTTCCTCTTTCGGTGCTCCTGAGGCGTGAATTGGCAAATGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCGTGCCAGAGCAAGAAAGGAGAGGATTTCACTCTGCTCAAGGCGGAGTGCCAGAGGATGGTGGGTGATGGGGTCTCTACATATTCCGTTTATGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTTTTAAGCGCGATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCCTTGCCTAGAGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGTACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGTGTACTTGAATCTGCTGAAGGTGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTTCGCATCACCTCTAGTGGGGGTGAGGTTGGTAGGCTAAATACTGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCTTGTGTCTTTCACGATCTATTGGAGATATGGATATTGGTGAATTTATTGTCCCTGTACCATATGTAAAACAAGTGAAGCTTTCCACTGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTCTGGGATGCTCTACCTGCAGAAGTGGCCTTTGATTGTTGTCGTGGCATGTCAGCAGAGGCTTCTGCACCACAAATTGTTAAAGAAGCCGTACAAGCAAAGGGACTTAGAGATGATACAACCTGTATCGTTGTTGATATATTACCTCAGGAGAAGCCAACTGCTTCTGTGCCACACCAGAAGAAGCCAGTAAAAGGAATGCTTAAGTCCATGTTTCGTAAAAAGTCTTCTGAATCATCTTCTTATATTGACAAAGAATACTTGGAGCCAGATGTAGTGGCGGAACTGTATGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACTAAATATCCACTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTATGTCAAGTGGAGATAAAACCTGGAGAGGGTATTTCAATACATGAGGGTGCCCCCAACCCTCAAAAATTGCGTCCCTGGGACGGGCCTTTCCTTTGCTCAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAAATCAACAGATAGACTTAGCAGCGGAAGTGACGAATGA 1287 0.4429 MSAKSEHQTVPLSVLLRRELANEKIEKPEIVHGQACQSKKGEDFTLLKAECQRMVGDGVSTYSVYGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQEKVQKSGTTVTFVIIEGWVVTVASVGDSRCVLESAEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVAFDCCRGMSAEASAPQIVKEAVQAKGLRDDTTCIVVDILPQEKPTASVPHQKKPVKGMLKSMFRKKSSESSSYIDKEYLEPDVVAELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGISIHEGAPNPQKLRPWDGPFLCSSCQEKKEAMEGKKSTDRLSSGSDE. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03714 428 MobiDBLite consensus disorder prediction 409 428 - -
Seca8g03714 428 Pfam Protein phosphatase 2C 43 283 IPR001932 -
Seca8g03714 428 ProSiteProfiles PPM-type phosphatase domain profile. 41 293 IPR001932 -
Seca8g03714 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Seca8g03714 428 SMART PP2C_4 21 291 IPR001932 -
Seca8g03714 428 CDD PP2Cc 39 293 IPR001932 -
Seca8g03714 428 Gene3D - 30 301 IPR036457 -
Seca8g03714 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Seca8g03714 428 PANTHER PROTEIN PHOSPHATASE 34 292 IPR015655 GO:0004722|GO:0006470
Seca8g03714 428 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03714 Seca-Chr8 106889884 106894656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03714 1 427 PP2C-type Phosphatase Gene Family AT1G47380 80.140 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03714 - - gmx:100778367 780.785