Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g03674 | ATGATCCTCGACCATTCAGTGTTCTCTGGAATTGCGGATATTCATGACCGACACAGGGATATGCGAATTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAACGCATTGGAAATGTGAATACAGGATTGAGTGAGGAGAACATATTGAAACATTTGAAGCAGAAGAAGTATTCAGTTGAATCAGGATCTCAGCGTGAGGCAGAACCCTGCTGTGTTTGTCAGGAGGAGTATAATGATGGAGATGATATTGGATCATTGGATTGTGGACATGATTACCATACCGACTGTATTAAACAGTGGCTAGTGCATAAGAATCTGTGTCCCATTTGTAAAAGAACAGGGTTGGCAACATGA | 366 | 0.4126 | MILDHSVFSGIADIHDRHRDMRIDVDNMSYEELLALEERIGNVNTGLSEENILKHLKQKKYSVESGSQREAEPCCVCQEEYNDGDDIGSLDCGHDYHTDCIKQWLVHKNLCPICKRTGLAT. | 122 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g03674 | 121 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 1 | 119 | IPR045191 | GO:0061630 | |
Seca8g03674 | 121 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 118 | IPR013083 | - | |
Seca8g03674 | 121 | ProSiteProfiles | Zinc finger RING-type profile. | 74 | 115 | IPR001841 | - | |
Seca8g03674 | 121 | SUPERFAMILY | RING/U-box | 73 | 117 | - | - | |
Seca8g03674 | 121 | Pfam | Ring finger domain | 74 | 115 | IPR001841 | - | |
Seca8g03674 | 121 | SMART | ring_2 | 74 | 114 | IPR001841 | - | |
Seca8g03674 | 121 | FunFam | E3 ubiquitin-protein ligase MBR2 | 42 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g03674 | Seca-Chr8 | 105915162 | 105916105 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g03674 | 1 | 121 | C3H Transcription Factor Family | AT2G15530 | 61.600 | 7.56e-54 | 177 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g03674 | - | - | psat:127091144 | 217.238 |