Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03672 ATGGCTGAAGAAGAACAACAACCACCTCAGCACGGTGGTTTCGCTTCTCTCCCACCCGGTTGCCGGTTCTTCCCCTCCGAGGAGCTTCTCCTCGGATACTATCTATTTAACAAGAACACTAACGAAGCAGGGAATTTCAATGGTGCTAATTTAATCACGGAACTTGACCTCTACAATTATGATCCATTTGATTTGCCCGACGCTGCGGGATTTTCGTACGGTCACCGAGGGAGGAAGAGGCATTGGTACTGTTATACGGTTAGGGCTGTGAAGGGAAAAAGGATTGCTGGGAGCGGGTTCTGGCTCCGGAAGGGAAAGGTTCGGGATGTTCTCGGTGGCGCTAGGAACTTCGTTATGGGTACCAGAACCCGCTTCGTTTTCTATATTGGAAATTCCCTAAAGAATGCTACCAGGACCCCTTGGATTTTGGACGAGTATGCCTTGGTTGACCATCATCTGGTTTCTTTTGTTCTTTGCCGTGTATATTTAAAGCCTCATCAAAAGAAATCTCCATCGGAGATTGGTCTCAGTTCTTTGGCAGAAGAGAGTGTCACTGCAATGCGCCACATTGGTACTCAGCTTGATGGACATGTCGGGTCTGATGGTGTTGAAGCTAAAGCTTGTGGTGATAATTCTGTTGACAGGAAGAATGAGGTCTCTGAGCATCCACTTAGATGTGGTGGTGGACAAGGTGATAATCCAGTTGTGACTGCACCATGTTCTGTGGATCCTCAGGGCAGTCAGCAGGAAAGGCTTTCTGGACTTCCCAACGGTGGTGCATTATTCATTGAAGCTATAGCATCTCAGCGAGATTTACTTTACATTCAAGAGCAGGATTTCATAGAATTGAATGATCTGGCATGA 864 0.4699 MAEEEQQPPQHGGFASLPPGCRFFPSEELLLGYYLFNKNTNEAGNFNGANLITELDLYNYDPFDLPDAAGFSYGHRGRKRHWYCYTVRAVKGKRIAGSGFWLRKGKVRDVLGGARNFVMGTRTRFVFYIGNSLKNATRTPWILDEYALVDHHLVSFVLCRVYLKPHQKKSPSEIGLSSLAEESVTAMRHIGTQLDGHVGSDGVEAKACGDNSVDRKNEVSEHPLRCGGGQGDNPVVTAPCSVDPQGSQQERLSGLPNGGALFIEAIASQRDLLYIQEQDFIELNDLA. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03672 287 PANTHER NAC TRANSCRIPTION FACTOR 56 17 188 - -
Seca8g03672 287 MobiDBLite consensus disorder prediction 209 230 - -
Seca8g03672 287 SUPERFAMILY NAC domain 14 164 IPR036093 GO:0003677|GO:0006355
Seca8g03672 287 ProSiteProfiles NAC domain profile. 17 164 IPR003441 GO:0003677|GO:0006355
Seca8g03672 287 Pfam No apical meristem (NAM) protein 18 148 IPR003441 GO:0003677|GO:0006355
Seca8g03672 287 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03672 Seca-Chr8 105886339 105889022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03672 16 164 NAC Transcription Factor Family AT3G15500 37.037 3.78e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca8g03672 NAM 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03672 - - gmx:100785871 330.102