Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g03666 | ATGGTTAGATTTTATGGGCTGAATAGAAAGCAGAGTGTTCTATTTTGCTACAAGGGTGGAAACCAATTCTATATTTTGGTGGGAAATCGTTTCGGGGTTGAAATTAAATACCCCCAAAAGCCAAGTGAGGTAGTGGAAATATCTTCAGATGATAGTGAAACTGACCATGAAGGTCATGTCAATTCTGTTGATGATGGAAGTGATCCTGAGGATTTCCCTTTCTGGACTATGACAATGTCCAAGTCATCTACTTCAGGAAGGAATGCTTTGCCTATTCCTGCAAAATTTGTCAGGGAGGGGCTTCTGCAAAGTCATTGGGTTTTGACTTTAAGACTTGACAACGGTGATCAGATTCTTTGCAAAATAATAAAAGGTTATAGGAGGCAGAATGAACGATATCTTGGTAGTGGTTGGTACAAGTTTTGCCATGACAAAAAATTCAAGGAGGGGGATATGCTGTTGATTTATTCAAATGGTGATCCTTAA | 486 | 0.3909 | MVRFYGLNRKQSVLFCYKGGNQFYILVGNRFGVEIKYPQKPSEVVEISSDDSETDHEGHVNSVDDGSDPEDFPFWTMTMSKSSTSGRNALPIPAKFVREGLLQSHWVLTLRLDNGDQILCKIIKGYRRQNERYLGSGWYKFCHDKKFKEGDMLLIYSNGDP. | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g03666 | 161 | CDD | B3_DNA | 78 | 161 | IPR003340 | GO:0003677 | |
Seca8g03666 | 161 | Gene3D | - | 57 | 160 | IPR015300 | - | |
Seca8g03666 | 161 | Pfam | B3 DNA binding domain | 77 | 156 | IPR003340 | GO:0003677 | |
Seca8g03666 | 161 | SUPERFAMILY | DNA-binding pseudobarrel domain | 71 | 159 | IPR015300 | - | |
Seca8g03666 | 161 | ProSiteProfiles | B3 DNA-binding domain profile. | 75 | 161 | IPR003340 | GO:0003677 | |
Seca8g03666 | 161 | MobiDBLite | consensus disorder prediction | 46 | 67 | - | - | |
Seca8g03666 | 161 | MobiDBLite | consensus disorder prediction | 46 | 66 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g03666 | Seca-Chr8 | 105802731 | 105803630 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Seca8g03666 | B3 | 1.5e-09 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g03666 | - | K19000 | lja:Lj0g3v0086279.1 | 57.3806 |